Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.5e-109 398.3 200 100.0
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 3.9e-68 261.9 195 74.4
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 3.3e-67 258.8 197 72.6
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.8e-66 255.0 196 70.9
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.8e-66 255.0 196 70.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.1e-65 253.8 209 67.0
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.2e-63 246.1 196 69.4
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 7.5e-59 231.1 194 64.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 8.2e-58 227.6 194 64.4
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.4e-57 226.9 194 64.4
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.8e-57 226.5 194 64.4
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.4e-57 226.1 194 63.9
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 4.1e-57 225.3 194 63.4
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 7.7e-56 221.1 197 60.9
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.7e-55 219.9 136 77.9
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 8.5e-55 217.6 164 67.7
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.5e-54 216.9 192 63.5
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.9e-54 216.5 197 60.4
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 2.5e-54 216.1 193 63.7
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 4.2e-54 215.3 203 61.1
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 4.2e-54 215.3 200 59.5
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.6e-53 213.4 195 61.0
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.6e-53 213.4 153 65.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.7e-53 212.6 197 59.9
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 6.1e-53 211.5 125 80.8
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 6.1e-53 211.5 154 66.9
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 8.0e-53 211.1 162 68.5
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.8e-52 209.9 200 58.0
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.3e-52 209.5 128 76.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.0e-52 209.1 146 68.5
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 3.0e-52 209.1 192 60.4
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 3.0e-52 209.1 139 73.4
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 4.0e-52 208.8 191 62.8
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 4.0e-52 208.8 144 68.8
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 5.2e-52 208.4 194 59.3
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 6.8e-52 208.0 139 72.7
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 8.8e-52 207.6 176 63.6
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.5e-51 206.8 195 61.5
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.5e-51 206.8 193 59.6
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.5e-51 206.8 200 60.0
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.6e-51 206.1 192 60.9
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 3.4e-51 205.7 125 75.2
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 4.4e-51 205.3 138 73.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 4.4e-51 205.3 138 73.9
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 4.4e-51 205.3 138 73.9
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.4e-51 205.3 194 59.8
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.7e-51 204.9 197 58.4
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 7.5e-51 204.5 138 73.9
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 7.5e-51 204.5 200 57.0
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 7.5e-51 204.5 194 59.8
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 7.5e-51 204.5 194 59.8
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 7.5e-51 204.5 194 58.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 9.8e-51 204.1 200 59.0
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 9.8e-51 204.1 199 55.8
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-50 203.8 138 73.2
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.3e-50 203.8 191 58.1
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 1.7e-50 203.4 195 60.0
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.7e-50 203.4 191 59.7
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.8e-50 202.6 174 60.9
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.8e-50 202.6 200 58.0
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.8e-50 202.6 161 63.4
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 3.7e-50 202.2 199 58.3
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 3.7e-50 202.2 199 60.8
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 4.8e-50 201.8 137 70.1
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.8e-50 201.8 182 62.6
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 4.8e-50 201.8 209 53.1
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 6.3e-50 201.4 199 60.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 6.3e-50 201.4 194 57.7
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.1e-49 200.7 193 60.1
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.4e-49 200.3 187 57.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.4e-49 200.3 200 55.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.4e-49 199.5 147 68.0
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 3.1e-49 199.1 196 57.1
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 4.1e-49 198.7 187 57.2
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 5.4e-49 198.4 193 59.1
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 7.0e-49 198.0 187 55.6
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 7.0e-49 198.0 195 55.9
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 9.1e-49 197.6 200 55.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.0e-48 196.4 204 55.4
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.0e-48 196.4 207 55.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.0e-48 196.4 196 57.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 2.0e-48 196.4 159 62.9
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 2.7e-48 196.1 179 59.8
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 3.5e-48 195.7 203 56.2
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 7.7e-48 194.5 183 59.0
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 7.7e-48 194.5 131 71.0
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.3e-47 193.7 201 54.7
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.3e-47 193.0 191 56.0
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.9e-47 192.6 194 58.8
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.5e-47 191.4 215 53.5
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.5e-46 189.5 144 61.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 7.2e-46 188.0 191 57.6
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.2e-45 187.2 111 76.6
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.1e-45 186.4 201 52.7
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 4.7e-45 185.3 141 62.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.7e-45 185.3 197 55.8
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 4.7e-45 185.3 200 51.5
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.0e-44 184.1 116 76.7
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.4e-44 183.7 196 52.0
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 4.0e-44 182.2 116 78.4
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 9.8e-43 177.6 176 58.5
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 4.9e-42 175.3 153 56.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 4.1e-41 172.2 234 45.3
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 4.1e-41 172.2 113 71.7
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 3.5e-40 169.1 172 52.9
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 5.9e-40 168.3 188 50.5
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.6e-37 160.2 91 79.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 3.0e-36 156.0 133 56.4
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.2e-35 154.1 155 61.3
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.4e-35 152.5 151 60.9
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.9e-34 149.4 122 62.3
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 6.4e-34 148.3 85 81.2
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 6.4e-34 148.3 115 62.6
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.4e-33 146.4 197 44.2
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 3.2e-33 146.0 120 65.0
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 9.2e-33 144.4 130 60.8
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 2.0e-32 143.3 109 62.4
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 6.0e-32 141.7 156 55.8
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.3e-31 140.6 149 55.7
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 2.5e-30 136.3 90 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.6e-29 132.5 109 58.7
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 6.2e-29 131.7 73 86.3
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 8.3e-26 121.3 128 43.8
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 9.2e-25 117.9 122 56.6
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.0e-23 112.8 116 48.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.3e-20 103.2 90 48.9
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 8.9e-20 101.3 111 44.1
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.3e-18 97.4 125 48.8
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 2.4e-17 93.2 99 50.5
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 9.5e-14 81.3 110 38.2
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.2e-13 80.9 61 63.9
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.3e-10 70.9 234 29.9
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 4.1e-09 65.9 42 71.4
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 3.3e-06 56.2 61 55.7


User provided reference genes

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