Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 2.7e-127 458.8 241 100.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 7.1e-88 327.8 235 74.0
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 1.2e-82 310.5 242 69.0
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 4.3e-69 265.4 241 60.6
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 2.1e-68 263.1 243 62.1
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 3.9e-62 242.3 208 63.9
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 2.1e-60 236.5 204 62.7
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 8.1e-60 234.6 248 55.2
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.1e-59 234.2 240 57.5
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 3.1e-59 232.6 244 57.0
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 3.1e-59 232.6 242 56.6
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.2e-58 230.7 223 61.0
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 2.0e-58 229.9 241 56.0
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 4.5e-58 228.8 244 53.7
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 4.5e-58 228.8 232 57.3
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.3e-57 227.3 223 56.5
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 2.2e-57 226.5 241 55.6
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.9e-57 226.1 242 54.1
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.9e-57 226.1 242 54.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 2.9e-57 226.1 241 55.6
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 2.9e-57 226.1 240 54.6
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 4.9e-57 225.3 243 56.8
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 1.4e-56 223.8 243 53.9
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.4e-56 223.0 242 53.3
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 3.2e-56 222.6 231 56.3
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 3.2e-56 222.6 242 53.3
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.2e-55 220.7 194 63.9
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.2e-55 220.7 235 56.2
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.6e-55 220.3 245 55.9
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.5e-55 219.2 242 52.9
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 3.5e-55 219.2 242 52.9
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 1.0e-54 217.6 234 54.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.3e-54 217.2 228 56.1
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.3e-54 217.2 228 56.1
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 1.8e-54 216.9 227 57.3
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 2.3e-54 216.5 232 55.2
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 3.0e-54 216.1 209 59.8
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 3.0e-54 216.1 209 59.3
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 3.0e-54 216.1 221 57.5
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 3.9e-54 215.7 259 52.9
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 3.9e-54 215.7 169 70.4
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.5e-53 213.8 240 55.4
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 2.5e-53 213.0 242 52.9
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.5e-53 213.0 242 54.5
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 2.5e-53 213.0 250 52.0
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 3.3e-53 212.6 241 55.2
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 3.3e-53 212.6 213 57.7
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 4.3e-53 212.2 241 56.0
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 5.6e-53 211.8 258 50.0
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 7.4e-53 211.5 214 59.8
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.6e-52 210.3 242 55.0
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 4.8e-52 208.8 194 61.9
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 4.8e-52 208.8 218 56.0
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 4.8e-52 208.8 237 53.2
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 4.8e-52 208.8 208 58.7
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.8e-51 206.8 212 59.9
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 2.4e-51 206.5 238 53.8
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 4.0e-51 205.7 240 51.2
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 9.0e-51 204.5 231 53.2
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 9.0e-51 204.5 212 59.0
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.2e-50 204.1 208 59.1
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.5e-50 203.8 249 53.4
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 1.5e-50 203.8 209 56.9
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 2.6e-50 203.0 247 51.8
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 4.9e-49 198.7 227 55.9
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 6.5e-49 198.4 225 50.7
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.1e-48 197.6 291 46.0
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.1e-48 197.6 279 47.7
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.4e-48 197.2 226 51.8
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.9e-48 196.8 192 58.9
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 4.2e-48 195.7 238 50.4
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 7.1e-48 194.9 247 49.8
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 1.2e-47 194.1 242 50.8
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 2.1e-47 193.4 242 49.2
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.5e-47 192.6 190 55.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 7.9e-47 191.4 169 61.5
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 1.8e-46 190.3 256 47.7
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 8.7e-46 188.0 183 61.7
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 2.5e-45 186.4 227 52.9
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.8e-44 183.0 189 54.0
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.8e-44 183.0 175 58.3
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 8.2e-44 181.4 275 43.3
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 1.4e-43 180.6 216 54.2
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 3.1e-43 179.5 209 52.6
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 5.3e-43 178.7 247 47.4
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 2.5e-40 169.9 178 55.6
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 4.6e-39 165.6 225 49.3
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 4.6e-39 165.6 174 54.0
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 1.0e-38 164.5 234 46.2
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 3.0e-38 162.9 242 44.6
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 3.0e-38 162.9 242 44.6
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 3.9e-38 162.5 122 68.0
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 5.7e-37 158.7 116 69.0
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 1.8e-35 153.7 167 55.7
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 4.1e-35 152.5 281 40.9
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 2.5e-32 143.3 239 41.8
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 9.4e-32 141.4 131 59.5
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 2.1e-31 140.2 220 44.5
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 4.6e-31 139.0 233 40.3
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 3.9e-30 136.0 230 39.1
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 9.1e-27 124.8 171 48.0
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 1.6e-23 114.0 126 49.2
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 1.4e-22 110.9 213 36.2
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.8e-22 110.5 106 55.7
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.8e-22 110.5 196 38.3
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 2.3e-22 110.2 191 44.0
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 5.2e-22 109.0 227 36.6
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 1.1e-16 91.3 145 46.2
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 1.2e-15 87.8 115 51.3
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 2.1e-15 87.0 126 39.7
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 6.1e-15 85.5 115 50.4
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 1.5e-13 80.9 115 52.2
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 5.7e-13 79.0 92 54.3
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 6.3e-12 75.5 50 68.0
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 1.2e-10 71.2 68 52.9
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 5.9e-10 68.9 49 71.4
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 5.9e-10 68.9 97 53.6
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 3.8e-09 66.2 51 66.7
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 1.9e-08 63.9 129 38.0
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 4.7e-07 59.3 78 46.2
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 3.0e-06 56.6 152 34.2


User provided reference genes

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