Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 6.8e-58 227.3 126 100.0
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 3.6e-35 151.8 128 69.5
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.3e-34 149.1 125 72.0
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.5e-33 146.4 124 69.4
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.0e-29 133.7 157 56.1
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 2.3e-29 132.5 125 60.0
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 3.0e-29 132.1 122 63.9
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.1e-28 130.2 125 63.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 1.1e-28 130.2 125 60.8
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 1.1e-28 130.2 125 60.8
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.5e-28 129.0 125 65.6
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 2.8e-27 125.6 107 70.1
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 4.7e-27 124.8 130 60.0
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 1.4e-26 123.2 128 59.4
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 6.8e-26 120.9 123 61.8
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 8.9e-26 120.6 125 58.4
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 1.2e-25 120.2 128 64.1
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.2e-25 120.2 128 64.1
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.5e-25 119.8 128 58.6
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.0e-25 119.4 128 63.3
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 3.4e-25 118.6 126 57.1
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 7.6e-25 117.5 157 51.6
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 1.7e-24 116.3 128 61.7
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.2e-24 115.9 109 64.2
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 2.9e-24 115.5 127 55.9
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 2.9e-24 115.5 125 54.4
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.9e-24 115.5 122 58.2
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 3.8e-24 115.2 122 59.0
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 8.4e-24 114.0 125 53.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 3.2e-23 112.1 125 56.8
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 3.2e-23 112.1 125 56.0
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 7.1e-23 110.9 123 55.3
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 9.3e-23 110.5 106 60.4
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 9.3e-23 110.5 129 53.5
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 9.3e-23 110.5 125 55.2
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.2e-22 110.2 121 56.2
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 1.6e-22 109.8 124 54.0
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 2.7e-22 109.0 125 57.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 3.5e-22 108.6 134 56.0
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 3.5e-22 108.6 128 53.9
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.7e-21 106.3 132 51.5
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.3e-21 105.9 127 55.1
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.3e-21 105.9 130 51.5
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 3.9e-21 105.1 130 52.3
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 5.1e-21 104.8 149 50.3
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 5.1e-21 104.8 129 53.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 5.1e-21 104.8 131 55.7
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 6.6e-21 104.4 125 56.0
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 6.6e-21 104.4 130 50.8
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 8.7e-21 104.0 122 54.1
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 1.1e-20 103.6 127 57.5
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.1e-20 103.6 129 51.2
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.1e-20 103.6 130 50.8
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 1.1e-20 103.6 127 54.3
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.5e-20 103.2 104 59.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.5e-20 103.2 99 63.6
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.9e-20 102.8 123 53.7
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.5e-20 102.4 123 55.3
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 3.3e-20 102.1 107 57.9
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 3.3e-20 102.1 131 55.0
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 4.3e-20 101.7 101 58.4
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 7.3e-20 100.9 131 55.0
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 9.6e-20 100.5 133 51.9
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 9.6e-20 100.5 107 56.1
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 1.3e-19 100.1 125 53.6
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 1.3e-19 100.1 126 54.8
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.6e-19 99.8 126 50.0
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-19 99.8 126 50.0
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.6e-19 99.8 126 50.0
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.1e-19 99.4 106 56.6
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 2.8e-19 99.0 125 50.4
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 2.8e-19 99.0 125 50.4
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.8e-19 99.0 127 53.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.8e-19 99.0 128 50.0
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 3.6e-19 98.6 125 49.6
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 4.8e-19 98.2 97 59.8
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 4.8e-19 98.2 128 50.8
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 4.8e-19 98.2 111 55.9
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 6.2e-19 97.8 109 56.9
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 8.1e-19 97.4 106 55.7
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 8.1e-19 97.4 128 46.9
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.1e-18 97.1 125 48.8
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.1e-18 97.1 129 49.6
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.4e-18 96.7 125 48.8
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 2.4e-18 95.9 125 49.6
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 2.4e-18 95.9 83 63.9
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 2.4e-18 95.9 83 63.9
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 3.1e-18 95.5 127 52.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 3.1e-18 95.5 125 48.0
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 4.0e-18 95.1 76 69.7
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 5.3e-18 94.7 125 47.2
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 5.3e-18 94.7 76 69.7
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 5.3e-18 94.7 76 69.7
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 6.9e-18 94.4 110 50.0
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.5e-17 93.2 123 49.6
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 3.4e-17 92.0 128 48.4
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 4.4e-17 91.7 129 47.3
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.3e-16 90.1 137 48.9
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 2.9e-16 89.0 125 49.6
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.4e-15 86.7 91 54.9
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.1e-14 82.8 125 44.8
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 7.9e-14 80.9 114 45.6
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 7.9e-14 80.9 106 49.1
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.3e-13 79.3 106 48.1
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 6.6e-13 77.8 81 54.3
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.9e-12 76.3 108 46.3
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 4.0e-10 68.6 70 52.9
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.2e-08 62.8 73 50.7


User provided reference genes

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