Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00081 Erythranthe guttata HOM05D002657 ORTHO05D003059 8.8e-163 577.0 316 100.0
Migut.F00080 Erythranthe guttata HOM05D002657 ORTHO05D003059 5.0e-57 225.7 305 48.2
Migut.F00936 Erythranthe guttata HOM05D002657 ORTHO05D003059 7.2e-40 168.7 297 41.1
TWI60G0601 Tripterygium wilfordii HOM05D002657 ORTHO05D003059 8.8e-38 161.8 297 40.4
SalBow2G3352 Salvia bowleyana HOM05D002657 ORTHO05D003059 9.7e-37 158.3 307 39.1
Lj3A885T45 Lonicera japonica HOM05D002657 ORTHO05D003059 8.5e-33 145.2 297 38.4
Dinv17247 Davidia involucrata HOM05D002657 ORTHO05D003059 7.2e-32 142.1 297 38.7
Lalb_Chr09g0320111 Lupinus albus HOM05D002657 ORTHO05D003059 9.4e-32 141.7 298 37.2
TAR375G0807 Trochodendron aralioides HOM05D002657 ORTHO05D003059 3.6e-31 139.8 288 38.2
Glyma.11G009200 Glycine max HOM05D002657 ORTHO05D003059 8.0e-31 138.7 297 36.0
Dinv29136 Davidia involucrata HOM05D002657 ORTHO05D003059 5.2e-30 136.0 275 37.8
SGA_v2.0_scaffold50G18450 Striga asiatica HOM05D002657 ORTHO05D003059 8.8e-30 135.2 279 37.6
Lalb_Chr05g0211221 Lupinus albus HOM05D002657 ORTHO05D003059 1.1e-29 134.8 298 36.2
Nn1g05150 Nelumbo nucifera HOM05D002657 ORTHO05D003059 1.1e-29 134.8 293 36.5
Psat2g189280 Pisum sativum HOM05D002657 ORTHO05D003059 1.5e-29 134.4 297 34.7
MD01G1237800 Malus domestica HOM05D002657 ORTHO05D003059 2.0e-29 134.0 288 36.8
LjContig00222g0028031 Lotus japonicus HOM05D002657 ORTHO05D003059 4.4e-29 132.9 298 35.9
PGR042G1453 Punica granatum HOM05D002657 ORTHO05D003059 5.7e-29 132.5 288 37.2
Gorai.007G348400 Gossypium raimondii HOM05D002657 ORTHO05D003059 1.7e-28 131.0 288 36.1
Ca_24433_v3 Cicer arietinum L. HOM05D002657 ORTHO05D003059 6.3e-28 129.0 297 34.3
TWI34G0829 Tripterygium wilfordii HOM05D002657 ORTHO05D003059 6.3e-28 129.0 310 35.8
Ah.08g218170 Amaranthus hybridus HOM05D002657 ORTHO05D003059 1.8e-27 127.5 352 31.2
Thhalv10012674m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 1.8e-27 127.5 285 36.8
Duzib177G1021 Durio zibethinus HOM05D002657 ORTHO05D003059 3.1e-27 126.7 288 36.5
Prupe.2G328200 Prunus persica HOM05D002657 ORTHO05D003059 3.1e-27 126.7 288 36.8
Sp6g27420 Schrenkiella parvula HOM05D002657 ORTHO05D003059 3.1e-27 126.7 277 36.5
VMungo1215G0687 Vigna mungo HOM05D002657 ORTHO05D003059 5.3e-27 125.9 297 34.0
Manes.09G128400 Manihot esculenta HOM05D002657 ORTHO05D003059 9.1e-27 125.2 298 34.6
Lj3g0004765 Lotus japonicus HOM05D002657 ORTHO05D003059 1.2e-26 124.8 297 36.0
CARHR076960 Cardamine hirsuta HOM05D002657 ORTHO05D003059 2.0e-26 124.0 269 36.8
RcHm_v2.0_Chr1g0384501 Rosa chinensis HOM05D002657 ORTHO05D003059 3.5e-26 123.2 297 35.7
unitig_90.g27540 Utricularia gibba HOM05D002657 ORTHO05D003059 1.0e-25 121.7 297 35.7
Nitab4.5_0002998g0040 Nicotiana tabacum HOM05D002657 ORTHO05D003059 1.3e-25 121.3 279 35.1
FvH4_7g34141 Fragaria vesca HOM05D002657 ORTHO05D003059 1.7e-25 120.9 297 35.4
Medtr5g007350 Medicago truncatula HOM05D002657 ORTHO05D003059 2.2e-25 120.6 308 32.1
Aqoxy3G02354 Aquilegia oxysepala HOM05D002657 ORTHO05D003059 2.9e-25 120.2 301 33.9
Thecc.05G219100 Theobroma cacao HOM05D002657 ORTHO05D003059 3.8e-25 119.8 288 35.8
Potri.013G079000 Populus trichocarpa HOM05D002657 ORTHO05D003059 5.0e-25 119.4 234 37.6
Oeu007519.1 Olea europaea HOM05D002657 ORTHO05D003059 6.5e-25 119.0 254 38.2
PSO063G0986 Papaver somniferum HOM05D002657 ORTHO05D003059 1.9e-24 117.5 309 34.0
Gohir.A08G221658 Gossypium hirsutum HOM05D002657 ORTHO05D003059 2.5e-24 117.1 298 33.2
Solyc06g072730.4 Solanum lycopersicum HOM05D002657 ORTHO05D003059 2.5e-24 117.1 247 37.7
CiPaw.06G035300 Carya illinoinensis HOM05D002657 ORTHO05D003059 3.2e-24 116.7 297 34.7
arahy.Tifrunner.gnm1.ann1.M9YASY Arachis hypogaea HOM05D002657 ORTHO05D003059 4.2e-24 116.3 297 33.0
Cfa016065 Carpinus fangiana HOM05D002657 ORTHO05D003059 9.4e-24 115.2 257 35.8
SalBow4G0313 Salvia bowleyana HOM05D002657 ORTHO05D003059 1.6e-23 114.4 387 29.2
SalBow4G0550 Salvia bowleyana HOM05D002657 ORTHO05D003059 1.6e-23 114.4 387 29.2
TPR.G19616 Trifolium pratense HOM05D002657 ORTHO05D003059 2.7e-23 113.6 298 33.9
Actinidia34325 Actinidia chinensis HOM05D002657 ORTHO05D003059 4.7e-23 112.8 297 33.7
Gohir.A11G303100 Gossypium hirsutum HOM05D002657 ORTHO05D003059 1.0e-22 111.7 288 33.7
CDE03G0449 Ceratophyllum demersum HOM05D002657 ORTHO05D003059 1.8e-22 110.9 285 33.7
Gorai.004G256500 Gossypium raimondii HOM05D002657 ORTHO05D003059 1.8e-22 110.9 298 32.9
Lalb_Chr01g0000851 Lupinus albus HOM05D002657 ORTHO05D003059 2.3e-22 110.5 257 35.4
Atru.chr12.1915 Acer truncatum HOM05D002657 ORTHO05D003059 3.0e-22 110.2 297 34.0
Oeu038085.1 Olea europaea HOM05D002657 ORTHO05D003059 3.0e-22 110.2 254 37.8
BcaC04g18855 Brassica carinata HOM05D002657 ORTHO05D003059 4.0e-22 109.8 255 34.5
Lalb_Chr16g0376551 Lupinus albus HOM05D002657 ORTHO05D003059 1.5e-21 107.8 297 34.3
Phvul.011G019100 Phaseolus vulgaris HOM05D002657 ORTHO05D003059 5.7e-21 105.9 269 34.2
Glyma.12G016900 Glycine max HOM05D002657 ORTHO05D003059 7.5e-21 105.5 260 34.2
PSO782G1876 Papaver somniferum HOM05D002657 ORTHO05D003059 7.5e-21 105.5 309 32.7
Nitab4.5_0000115g0370 Nicotiana tabacum HOM05D002657 ORTHO05D003059 9.8e-21 105.1 279 33.7
arahy.Tifrunner.gnm1.ann1.6I6CSY Arachis hypogaea HOM05D002657 ORTHO05D003059 1.3e-20 104.8 259 32.8
BolC9t58867H Brassica oleracea HOM05D002657 ORTHO05D003059 2.2e-20 104.0 278 31.3
GSVIVG01024346001 Vitis vinifera HOM05D002657 ORTHO05D003059 3.7e-20 103.2 312 32.4
A10p22490 Brassica napus HOM05D002657 ORTHO05D003059 8.3e-20 102.1 286 31.5
C09p60340 Brassica napus HOM05D002657 ORTHO05D003059 8.3e-20 102.1 278 31.7
AUR62039465 Chenopodium quinoa HOM05D002657 ORTHO05D003059 8.3e-20 102.1 335 29.3
Duzib106G0276 Durio zibethinus HOM05D002657 ORTHO05D003059 1.1e-19 101.7 376 29.5
VMungo1127G0287 Vigna mungo HOM05D002657 ORTHO05D003059 1.8e-19 100.9 260 33.8
BraA10t44308Z Brassica rapa HOM05D002657 ORTHO05D003059 3.1e-19 100.1 266 31.6
CSS0013936 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 3.1e-19 100.1 298 31.5
Gohir.D11G318400 Gossypium hirsutum HOM05D002657 ORTHO05D003059 3.1e-19 100.1 307 31.9
BolC3t13410H Brassica oleracea HOM05D002657 ORTHO05D003059 5.4e-19 99.4 243 34.6
BraA03t10117Z Brassica rapa HOM05D002657 ORTHO05D003059 5.4e-19 99.4 243 35.4
CARHR196450 Cardamine hirsuta HOM05D002657 ORTHO05D003059 7.0e-19 99.0 241 35.7
A03p07920 Brassica napus HOM05D002657 ORTHO05D003059 9.1e-19 98.6 243 33.3
Gohir.D08G241100 Gossypium hirsutum HOM05D002657 ORTHO05D003059 1.2e-18 98.2 269 32.3
arahy.Tifrunner.gnm1.ann1.0CRJ7F Arachis hypogaea HOM05D002657 ORTHO05D003059 1.6e-18 97.8 254 34.3
Sopen06g029110 Solanum pennellii HOM05D002657 ORTHO05D003059 3.5e-18 96.7 247 34.8
CiPaw.05G214700 Carya illinoinensis HOM05D002657 ORTHO05D003059 4.5e-18 96.3 256 34.4
MBI04_g41611_MAGBIO Magnolia biondii HOM05D002657 ORTHO05D003059 1.0e-17 95.1 327 29.1
CSS0037437 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.3e-17 94.7 288 31.6
CSS0045858 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.3e-17 94.7 288 31.6
Cc01_g00970 Coffea canephora HOM05D002657 ORTHO05D003059 1.3e-17 94.7 254 34.3
PGSC0003DMG400027037 Solanum tuberosum HOM05D002657 ORTHO05D003059 1.3e-17 94.7 203 38.4
BcaB01g05252 Brassica carinata HOM05D002657 ORTHO05D003059 2.2e-17 94.0 242 34.3
TAR374G0884 Trochodendron aralioides HOM05D002657 ORTHO05D003059 2.2e-17 94.0 261 34.9
COL.COLO4_15190 Corchorus olitorius HOM05D002657 ORTHO05D003059 2.9e-17 93.6 288 31.2
HanXRQChr16g0512141 Helianthus annuus HOM05D002657 ORTHO05D003059 3.8e-17 93.2 297 32.7
arahy.Tifrunner.gnm1.ann1.51ZP46 Arachis hypogaea HOM05D002657 ORTHO05D003059 5.0e-17 92.8 254 33.1
BcaB03g12538 Brassica carinata HOM05D002657 ORTHO05D003059 8.5e-17 92.0 262 27.5
Sed0022201 Sechium edule HOM05D002657 ORTHO05D003059 1.1e-16 91.7 288 31.9
CDE06G2095 Ceratophyllum demersum HOM05D002657 ORTHO05D003059 1.9e-16 90.9 285 31.2
Carub.0007s1326 Capsella rubella HOM05D002657 ORTHO05D003059 2.5e-16 90.5 257 28.8
Ca_27636_v3 Cicer arietinum L. HOM05D002657 ORTHO05D003059 2.5e-16 90.5 302 30.1
Glyma.11G108500 Glycine max HOM05D002657 ORTHO05D003059 3.2e-16 90.1 261 33.0
Gohir.D03G053600 Gossypium hirsutum HOM05D002657 ORTHO05D003059 7.2e-16 89.0 253 32.4
Potri.019G047600 Populus trichocarpa HOM05D002657 ORTHO05D003059 9.4e-16 88.6 207 36.2
Hund21160 Selenicereus undatus HOM05D002657 ORTHO05D003059 1.2e-15 88.2 118 48.3
AL3G12390 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 4.7e-15 86.3 226 32.3
Phvul.002G041100 Phaseolus vulgaris HOM05D002657 ORTHO05D003059 4.7e-15 86.3 251 29.5
Aa31LG2G2210 Aethionema arabicum HOM05D002657 ORTHO05D003059 6.1e-15 85.9 253 30.0
CARHR056460 Cardamine hirsuta HOM05D002657 ORTHO05D003059 6.1e-15 85.9 252 32.1
C03p09130 Brassica napus HOM05D002657 ORTHO05D003059 1.4e-14 84.7 243 31.7
AT3G02930 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 3.0e-14 83.6 225 32.0
AUR62027711 Chenopodium quinoa HOM05D002657 ORTHO05D003059 3.0e-14 83.6 300 27.7
Sabra19G0059600 Salix brachista HOM05D002657 ORTHO05D003059 3.0e-14 83.6 209 31.6
Carub.0003s0206 Capsella rubella HOM05D002657 ORTHO05D003059 2.0e-13 80.9 221 32.1
Thhalv10020078m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 2.0e-13 80.9 210 31.0
Rhsim03G0223300 Rhododendron simsii HOM05D002657 ORTHO05D003059 2.6e-13 80.5 244 31.1
MSTRG.7 Avicennia marina HOM05D002657 ORTHO05D003059 4.4e-13 79.7 121 40.5
Peaxi162Scf00133g00055 Petunia axillaris HOM05D002657 ORTHO05D003059 4.4e-13 79.7 297 29.6
Sp5g19380 Schrenkiella parvula HOM05D002657 ORTHO05D003059 5.7e-13 79.3 255 29.0
Sc05g0006950 Simmondsia chinensis HOM05D002657 ORTHO05D003059 9.8e-13 78.6 352 25.3
Eucgr.A02985 Eucalyptus grandis HOM05D002657 ORTHO05D003059 2.2e-12 77.4 288 28.8
BcaB01g06404 Brassica carinata HOM05D002657 ORTHO05D003059 6.3e-12 75.9 261 29.1
Peaxi162Scf00516g00642 Petunia axillaris HOM05D002657 ORTHO05D003059 6.3e-12 75.9 207 33.3
Sed0014338 Sechium edule HOM05D002657 ORTHO05D003059 1.1e-11 75.1 288 29.9
vmacro06532 Vaccinium macrocarpon HOM05D002657 ORTHO05D003059 1.4e-11 74.7 246 29.7
Sp3g01990 Schrenkiella parvula HOM05D002657 ORTHO05D003059 1.8e-11 74.3 211 30.3
AL7G25140 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 3.1e-11 73.6 186 33.3
C02p21090 Brassica napus HOM05D002657 ORTHO05D003059 7.0e-11 72.4 296 27.0
Gohir.A02G127400 Gossypium hirsutum HOM05D002657 ORTHO05D003059 7.0e-11 72.4 228 29.4
Medtr4g478190 Medicago truncatula HOM05D002657 ORTHO05D003059 7.0e-11 72.4 255 29.4
CAN.G65.127 Capsicum annuum HOM05D002657 ORTHO05D003059 9.1e-11 72.0 133 41.4
Glyma.01G233600 Glycine max HOM05D002657 ORTHO05D003059 9.1e-11 72.0 237 29.5
Os04g0592400 Oryza sativa ssp. japonica HOM05D002657 ORTHO05D003059 9.1e-11 72.0 261 27.6
Aa31LG11G12900 Aethionema arabicum HOM05D002657 ORTHO05D003059 1.2e-10 71.6 234 30.8
QL09p021240 Quercus lobata HOM05D002657 ORTHO05D003059 1.2e-10 71.6 250 30.4
Ah.15g092810 Amaranthus hybridus HOM05D002574 ORTHO05D002797 1.6e-10 71.2 122 38.5
EL10Ac8g20570 Beta vulgaris HOM05D002657 ORTHO05D003059 1.6e-10 71.2 122 40.2
Psat2g144480 Pisum sativum HOM05D002657 ORTHO05D003059 1.6e-10 71.2 238 29.4
CDE12G0025 Ceratophyllum demersum HOM05D002657 ORTHO05D003059 2.0e-10 70.9 273 27.8
THA.LOC104820899 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 2.7e-10 70.5 222 30.6
Actinidia08759 Actinidia chinensis HOM05D002657 ORTHO05D003059 3.5e-10 70.1 288 28.1
CDE06G2427 Ceratophyllum demersum HOM05D002657 ORTHO05D003059 3.5e-10 70.1 272 28.3
Aa31LG5G13430 Aethionema arabicum HOM05D002657 ORTHO05D003059 5.9e-10 69.3 226 31.0
CSS0006811 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.0e-09 68.6 243 28.0
Haze_00384 Corylus avellana HOM05D002657 ORTHO05D003059 1.1e-08 65.1 273 27.8
Gorai.003G055800 Gossypium raimondii HOM05D002657 ORTHO05D003059 1.1e-08 65.1 228 28.1
MD01G1238300 Malus domestica HOM05D002657 ORTHO05D003059 1.1e-08 65.1 297 26.9
Nitab4.5_0000021g0730 Nicotiana tabacum HOM05D002657 ORTHO05D003059 1.1e-08 65.1 208 28.8
MELO3C021858.2 Cucumis melo HOM05D002657 ORTHO05D003059 1.9e-08 64.3 83 50.6
Oeu027888.1 Olea europaea HOM05D002657 ORTHO05D003059 2.5e-08 63.9 247 28.7
unitig_32.g10703 Utricularia gibba HOM05D004950 ORTHO05D004838 2.5e-08 63.9 260 26.2
Actinidia28411 Actinidia chinensis HOM05D002657 ORTHO05D003059 3.3e-08 63.5 73 54.8
Manes.08G064501 Manihot esculenta HOM05D002657 ORTHO05D003059 3.3e-08 63.5 191 30.4
Ciclev10030659m.g Citrus clementina HOM05D002657 ORTHO05D003059 4.2e-08 63.2 194 30.4
CsaV3_2G036640 Cucumis sativus L. HOM05D002657 ORTHO05D003059 4.2e-08 63.2 83 49.4
DCAR_009021 Daucus carota HOM05D002657 ORTHO05D003059 4.2e-08 63.2 190 29.5
Sabra13G0073700 Salix brachista HOM05D002657 ORTHO05D003059 5.6e-08 62.8 128 36.7
vmacro12982 Vaccinium macrocarpon HOM05D004950 ORTHO05D004838 7.2e-08 62.4 289 26.3
BcaB04g21395 Brassica carinata HOM05D002657 ORTHO05D003059 9.5e-08 62.0 164 30.5
ClCG09G017190 Citrullus lanatus HOM05D002657 ORTHO05D003059 9.5e-08 62.0 201 32.3
FAN03G3506 Fragaria x ananassa HOM05D002657 ORTHO05D003059 9.5e-08 62.0 56 64.3
FAN10G3406 Fragaria x ananassa HOM05D002657 ORTHO05D003059 2.1e-07 60.8 95 46.3
Os02g0439200 Oryza sativa ssp. japonica HOM05D002657 ORTHO05D003059 2.8e-07 60.5 320 24.7
BcaC05g30495 Brassica carinata HOM05D002657 ORTHO05D003059 3.6e-07 60.1 246 26.0
BolC5t35053H Brassica oleracea HOM05D002657 ORTHO05D003059 3.6e-07 60.1 246 26.0
Lalb_Chr19g0140011 Lupinus albus HOM05D002657 ORTHO05D003059 6.1e-07 59.3 118 36.4
PGSC0003DMG400016794 Solanum tuberosum HOM05D004950 ORTHO05D004838 6.1e-07 59.3 288 27.1
Zm00001eb072310 Zea mays HOM05D002657 ORTHO05D003059 6.1e-07 59.3 187 27.3
BcaB05g25318 Brassica carinata HOM05D002657 ORTHO05D003059 8.0e-07 58.9 314 24.8
Zm00001eb024910 Zea mays HOM05D002657 ORTHO05D003059 8.0e-07 58.9 271 27.3
Nn5g29452 Nelumbo nucifera HOM05D002657 ORTHO05D003059 1.0e-06 58.5 194 28.9
Solyc03g097190.3 Solanum lycopersicum HOM05D002657 ORTHO05D003059 1.0e-06 58.5 168 32.7
A02p12970 Brassica napus HOM05D002657 ORTHO05D003059 3.0e-06 57.0 279 25.8
BraA02t06353Z Brassica rapa HOM05D002657 ORTHO05D003059 3.0e-06 57.0 279 25.8
A05p44190 Brassica napus HOM05D002657 ORTHO05D003059 4.0e-06 56.6 215 26.5
BraA06t23277Z Brassica rapa HOM05D002657 ORTHO05D003059 4.0e-06 56.6 215 26.5
Carub.0006s1495 Capsella rubella HOM05D002657 ORTHO05D003059 6.8e-06 55.8 215 28.4
Zm00001eb072330 Zea mays HOM05D002657 ORTHO05D003059 6.8e-06 55.8 283 23.7
AT5G16730 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 8.9e-06 55.5 215 27.4
Lalb_Chr08g0230971 Lupinus albus HOM05D004950 ORTHO05D004838 8.9e-06 55.5 279 27.6


User provided reference genes

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