Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00079 Erythranthe guttata HOM05D016915 ORTHO05D000816 3.3e-21 105.5 50 100.0
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 7.3e-13 77.8 44 79.5
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 9.6e-13 77.4 45 80.0
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 2.1e-12 76.3 44 77.3
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 2.1e-12 76.3 44 75.0
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 2.1e-12 76.3 44 77.3
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 2.8e-12 75.9 45 75.6
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.6e-12 75.5 43 76.7
SGA_v2.0_scaffold47G17571 Striga asiatica HOM05D000135 ORTHO05D000816 4.8e-12 75.1 43 76.7
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 1.4e-11 73.6 44 75.0
Migut.K01451 Erythranthe guttata HOM05D000135 ORTHO05D000816 9.0e-11 70.9 45 71.1
Rhsim08G0044100 Rhododendron simsii HOM05D000135 ORTHO05D000816 3.4e-10 68.9 45 68.9
Migut.K01452 Erythranthe guttata HOM05D016915 ORTHO05D000816 2.2e-09 66.2 44 68.2
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 2.9e-09 65.9 48 60.4
Rhsim10G0007700 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.9e-09 65.9 45 62.2
Rhsim10G0007900 Rhododendron simsii HOM05D000135 ORTHO05D000816 2.9e-09 65.9 45 62.2
Migut.K01450 Erythranthe guttata HOM05D000135 ORTHO05D000816 4.9e-09 65.1 44 65.9
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 4.9e-09 65.1 45 60.0
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.9e-09 65.1 45 60.0
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 4.9e-09 65.1 48 56.2
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 6.4e-09 64.7 46 60.9
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 6.4e-09 64.7 47 59.6
Glyma.16G059300 Glycine max HOM05D000135 ORTHO05D000816 1.1e-08 63.9 47 55.3
CSS0033756 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000816 1.4e-08 63.5 49 55.1
Haze_14848 Corylus avellana HOM05D000135 ORTHO05D000816 1.4e-08 63.5 52 57.7
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 1.4e-08 63.5 45 62.2
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 1.4e-08 63.5 45 57.8
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 1.4e-08 63.5 47 61.7
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 1.4e-08 63.5 41 65.9
Rhsim10G0008000 Rhododendron simsii HOM05D000135 ORTHO05D000816 1.4e-08 63.5 45 60.0
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 1.4e-08 63.5 47 59.6
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 1.9e-08 63.2 45 57.8
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 1.9e-08 63.2 47 57.4
Glyma.19G088200 Glycine max HOM05D000135 ORTHO05D000816 1.9e-08 63.2 47 59.6
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 1.9e-08 63.2 48 56.2
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.9e-08 63.2 44 65.9
Oeu035216.1 Olea europaea HOM05D000135 ORTHO05D000816 1.9e-08 63.2 45 64.4
Dinv33354 Davidia involucrata HOM05D000135 ORTHO05D000816 2.4e-08 62.8 45 64.4
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.4e-08 62.8 44 65.9
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.4e-08 62.8 44 65.9
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.2e-08 62.4 45 57.8
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 3.2e-08 62.4 45 57.8
unitig_748.g7057 Utricularia gibba HOM05D000135 ORTHO05D000816 3.2e-08 62.4 47 63.8
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 59.6
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 59.6
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 4.2e-08 62.0 44 63.6
Rhsim10G0007800 Rhododendron simsii HOM05D000135 ORTHO05D000816 4.2e-08 62.0 45 60.0
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 4.2e-08 62.0 45 57.8
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 59.6
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 4.2e-08 62.0 45 60.0
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 5.4e-08 61.6 44 63.6
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 5.4e-08 61.6 44 63.6
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 5.4e-08 61.6 44 63.6
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 5.4e-08 61.6 44 63.6
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 7.1e-08 61.2 47 59.6
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 7.1e-08 61.2 47 57.4
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 7.1e-08 61.2 45 57.8
Hma1.2p1_1219F.1_g267970 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 7.1e-08 61.2 45 60.0
Hma1.2p1_2105F.1_g314145 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 7.1e-08 61.2 45 60.0
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 7.1e-08 61.2 45 57.8
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 9.3e-08 60.8 45 55.6
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 9.3e-08 60.8 45 60.0
GSVIVG01010385001 Vitis vinifera HOM05D000135 ORTHO05D000816 9.3e-08 60.8 47 59.6
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 1.2e-07 60.5 47 53.2
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 1.2e-07 60.5 45 55.6
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 1.2e-07 60.5 44 61.4
GSVIVG01010378001 Vitis vinifera HOM05D000135 ORTHO05D000816 1.2e-07 60.5 46 60.9
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 1.6e-07 60.1 42 64.3
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.6e-07 60.1 44 61.4
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 1.6e-07 60.1 44 61.4
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 1.6e-07 60.1 44 61.4
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 44 61.4
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 44 63.6
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-07 59.7 45 55.6
Psat3g176000 Pisum sativum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 48 56.2
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 2.1e-07 59.7 49 51.0
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 2.7e-07 59.3 44 61.4
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.7e-07 59.3 44 61.4
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 3.5e-07 58.9 43 60.5
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 3.5e-07 58.9 47 55.3
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.5e-07 58.9 45 57.8
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
FAN04G2622 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
FAN13G2467 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
Prupe.5G000600 Prunus persica HOM05D000135 ORTHO05D000816 3.5e-07 58.9 43 62.8
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.5e-07 58.9 44 61.4
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.5e-07 58.9 48 60.4
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 4.6e-07 58.5 45 62.2
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 4.6e-07 58.5 45 62.2
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 4.6e-07 58.5 45 55.6
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 4.6e-07 58.5 44 61.4
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 4.6e-07 58.5 44 61.4
Sabra05G0201600 Salix brachista HOM05D000135 ORTHO05D000816 4.6e-07 58.5 47 55.3
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 6.0e-07 58.2 45 57.8
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 6.0e-07 58.2 45 55.6
Solyc06g073830.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 6.0e-07 58.2 42 61.9
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 6.0e-07 58.2 42 61.9
VMungo1383G0529 Vigna mungo HOM05D000135 ORTHO05D000816 6.0e-07 58.2 45 53.3
Ciclev10018267m.g Citrus clementina HOM05D000135 ORTHO05D000816 7.9e-07 57.8 41 61.0
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 7.9e-07 57.8 45 53.3
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 7.9e-07 57.8 45 57.8
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 7.9e-07 57.8 45 55.6
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 7.9e-07 57.8 47 53.2
Sc07g0004160 Simmondsia chinensis HOM05D000135 ORTHO05D000816 1.0e-06 57.4 45 57.8
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.0e-06 57.4 51 54.9
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.3e-06 57.0 48 52.1
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 1.3e-06 57.0 44 56.8
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 1.7e-06 56.6 51 54.9
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.7e-06 56.6 51 54.9
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 1.7e-06 56.6 47 59.6
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 1.7e-06 56.6 47 53.2
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 2.3e-06 56.2 46 58.7
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 2.3e-06 56.2 43 58.1
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.3e-06 56.2 49 51.0
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.3e-06 56.2 43 58.1
Duzib264G0451 Durio zibethinus HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 55.8
Duzib264G0910 Durio zibethinus HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 55.8
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 45 55.6
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 56.8
Potri.002G001400 Populus trichocarpa HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 53.2
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.9e-06 55.5 48 52.1
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.9e-06 55.5 45 60.0
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.1e-06 55.1 45 55.6
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.1e-06 55.1 45 55.6
SalBow5G4123 Salvia bowleyana HOM05D016915 ORTHO05D000816 5.1e-06 55.1 30 76.7
SalBow7G2391 Salvia bowleyana HOM05D016915 ORTHO05D352780 5.1e-06 55.1 30 76.7
TPR.G38330 Trifolium pratense HOM05D000135 ORTHO05D000816 5.1e-06 55.1 48 52.1
DCAR_015089 Daucus carota HOM05D000135 ORTHO05D000816 6.6e-06 54.7 41 58.5
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 6.6e-06 54.7 48 47.9
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 6.6e-06 54.7 45 53.3
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 6.6e-06 54.7 44 56.8
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 6.6e-06 54.7 44 56.8
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 8.7e-06 54.3 44 54.5
Sed0013041 Sechium edule HOM05D000135 ORTHO05D000816 8.7e-06 54.3 41 53.7
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 8.7e-06 54.3 44 54.5


User provided reference genes

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