Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 0.0e+00 1479.2 1026 100.0
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 1.1e-251 874.0 1033 71.1
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.5e-248 863.6 1004 69.0
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 5.8e-248 861.7 934 74.8
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.6e-242 843.6 1028 64.3
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 1.8e-233 813.5 849 74.1
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.3e-231 807.4 1028 64.8
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 5.4e-230 802.0 992 70.1
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 1.1e-227 794.3 1023 63.2
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 2.5e-227 793.1 987 66.1
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 1.3e-226 790.8 929 65.2
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 6.2e-226 788.5 1023 63.0
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 1.8e-225 786.9 1033 62.9
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 3.8e-223 779.2 870 75.9
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 2.1e-221 773.5 1062 64.5
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 3.5e-221 772.7 893 72.8
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 6.9e-217 758.4 893 71.4
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 2.0e-216 756.9 958 64.6
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 1.3e-212 744.2 987 64.7
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.9e-212 742.7 1073 61.8
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 4.3e-211 739.2 895 67.9
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 9.6e-211 738.0 895 67.3
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 2.8e-210 736.5 885 68.0
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 9.0e-209 731.5 899 65.7
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 1.2e-208 731.1 897 66.2
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 1.5e-208 730.7 896 70.3
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 4.5e-208 729.2 810 77.3
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 5.8e-208 728.8 811 75.1
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 1.7e-207 727.2 818 72.2
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 2.9e-207 726.5 813 74.8
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 3.8e-207 726.1 900 70.8
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 4.9e-207 725.7 835 73.5
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 1.1e-206 724.5 878 64.0
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 2.5e-206 723.4 875 61.7
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 4.2e-206 722.6 898 64.0
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 7.1e-206 721.8 892 70.4
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 7.1e-206 721.8 895 70.2
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 4.6e-205 719.2 820 72.2
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 7.9e-205 718.4 1032 62.7
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 1.0e-204 718.0 890 69.2
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.8e-204 717.2 825 75.0
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 3.0e-204 716.5 864 69.1
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 3.0e-204 716.5 839 74.6
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 3.9e-204 716.1 806 76.3
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.9e-204 716.1 810 74.1
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 5.1e-204 715.7 825 75.2
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 1.5e-203 714.1 876 70.2
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.9e-203 713.8 832 72.8
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 2.5e-203 713.4 895 69.7
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 3.3e-203 713.0 895 69.7
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 4.3e-203 712.6 807 73.9
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 7.4e-203 711.8 906 59.7
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 7.4e-203 711.8 800 74.2
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 1.6e-202 710.7 893 70.3
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 2.2e-202 710.3 851 73.6
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 3.7e-202 709.5 1062 56.3
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 6.3e-202 708.8 815 74.6
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 1.4e-201 707.6 895 69.3
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 6.9e-201 705.3 822 74.1
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 9.0e-201 704.9 895 69.1
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 2.6e-200 703.4 852 70.1
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 4.5e-200 702.6 825 74.2
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 7.7e-200 701.8 833 73.7
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 7.7e-200 701.8 1004 63.2
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 2.9e-199 699.9 817 72.9
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 6.5e-199 698.7 822 74.1
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 1.4e-198 697.6 808 74.6
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 3.2e-198 696.4 883 67.3
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 1.6e-197 694.1 899 69.3
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.6e-197 694.1 820 72.6
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 1.6e-197 694.1 816 73.8
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 3.6e-197 693.0 811 74.8
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 6.1e-197 692.2 840 68.5
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 8.8e-196 688.3 824 74.2
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.5e-195 687.6 843 72.1
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.0e-195 687.2 843 72.1
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 7.4e-195 685.3 801 70.8
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 4.8e-194 682.6 882 66.9
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 1.4e-193 681.0 892 67.6
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 3.1e-193 679.9 812 73.0
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 3.1e-193 679.9 814 70.0
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 2.6e-192 676.8 846 71.4
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 7.7e-192 675.2 814 72.9
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 1.7e-191 674.1 816 72.8
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 6.5e-191 672.2 829 72.4
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 2.5e-190 670.2 828 72.1
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 9.4e-190 668.3 834 69.5
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 1.0e-188 664.8 815 72.3
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 5.1e-188 662.5 891 66.4
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 8.8e-188 661.8 880 61.9
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 8.8e-188 661.8 818 69.4
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 5.7e-187 659.1 1013 55.6
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 2.2e-186 657.1 810 68.9
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 3.7e-186 656.4 820 70.1
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 7.0e-185 652.1 836 70.2
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 3.5e-184 649.8 863 68.8
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 7.7e-184 648.7 834 60.8
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 7.7e-184 648.7 806 70.7
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 2.9e-183 646.7 827 69.3
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 6.5e-183 645.6 829 71.2
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 3.2e-182 643.3 824 70.3
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 1.6e-181 641.0 810 71.9
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 3.6e-181 639.8 827 69.6
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 4.7e-181 639.4 814 66.0
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 2.0e-179 634.0 860 62.9
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 3.3e-179 633.3 827 69.2
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 5.7e-179 632.5 868 61.2
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 9.7e-179 631.7 828 68.8
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 1.4e-177 627.9 872 61.5
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 1.2e-176 624.8 868 60.4
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 1.2e-176 624.8 868 60.4
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 3.5e-176 623.2 824 68.6
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 3.5e-176 623.2 824 68.6
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 1.0e-175 621.7 845 69.0
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 1.7e-175 620.9 822 65.9
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 2.2e-175 620.5 845 66.6
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 2.5e-174 617.1 824 68.3
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 2.5e-174 617.1 824 68.3
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 3.2e-174 616.7 718 71.3
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 4.2e-174 616.3 812 68.7
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 4.0e-172 609.8 852 55.0
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 5.2e-172 609.4 761 70.0
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 8.8e-172 608.6 815 63.1
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 2.6e-171 607.1 838 62.8
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 7.0e-169 599.0 816 66.2
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 8.8e-164 582.0 867 59.6
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 7.5e-163 578.9 812 65.5
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 1.7e-162 577.8 871 59.5
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 2.8e-162 577.0 791 64.5
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 1.2e-160 571.6 867 59.5
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 2.3e-159 567.4 820 60.5
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 5.0e-159 566.2 820 62.0
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 6.6e-159 565.8 768 61.7
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.8e-156 557.8 830 64.8
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 8.9e-156 555.4 874 62.0
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 1.8e-153 547.7 794 50.6
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 8.6e-151 538.9 817 57.0
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 8.0e-149 532.3 742 62.3
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 6.8e-148 529.3 793 55.9
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 8.9e-148 528.9 891 60.6
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 6.4e-146 522.7 687 68.3
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 7.5e-139 499.2 686 71.9
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 2.7e-136 490.7 1014 39.1
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 6.0e-136 489.6 634 67.7
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.2e-129 467.2 855 49.1
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 9.2e-129 465.7 646 79.6
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 7.8e-128 462.6 887 52.1
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 5.2e-124 449.9 924 49.1
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 9.6e-118 429.1 802 52.5
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.3e-117 428.7 844 57.3
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 4.0e-116 423.7 598 64.2
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 1.3e-111 408.7 654 69.4
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 9.6e-110 402.5 940 44.8
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 1.1e-105 389.0 496 65.5
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 8.1e-101 372.9 947 48.4
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.3e-93 349.0 757 49.8
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 8.2e-93 346.3 320 68.4
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 1.0e-90 339.3 495 47.7
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 1.4e-89 335.5 650 56.6
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 8.7e-87 326.2 1291 29.6
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 2.3e-79 301.6 604 61.9
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 5.3e-76 290.4 473 47.1
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 5.0e-74 283.9 273 65.2
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 1.1e-70 272.7 318 79.9
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 2.1e-56 225.3 136 80.1
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 1.5e-49 202.6 227 51.1
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 9.8e-46 189.9 195 51.8
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 3.6e-32 144.8 128 62.5
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.8e-31 142.5 139 55.4
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 9.2e-28 130.2 71 83.1
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 1.9e-25 122.5 239 83.3
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 2.5e-25 122.1 122 57.4
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 3.2e-20 105.1 66 80.3
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 1.0e-18 100.1 60 78.3
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 7.1e-12 77.4 194 31.4
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 4.3e-09 68.2 59 54.2
Cre12.g525600 Chlamydomonas reinhardtii HOM05D003722 ORTHO05D004589 2.1e-08 65.9 232 27.2


User provided reference genes

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