Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 5.8e-98 360.9 187 100.0
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 3.3e-61 238.8 185 70.8
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.3e-57 226.9 185 67.0
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 2.9e-57 225.7 184 70.7
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.5e-48 196.8 186 60.8
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 2.5e-48 196.1 184 60.9
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.7e-47 192.6 185 62.2
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 4.7e-47 191.8 184 60.9
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 6.1e-47 191.4 191 60.7
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 8.0e-47 191.0 185 61.1
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-46 190.7 185 61.6
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 3.0e-46 189.1 184 59.2
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 3.0e-46 189.1 152 67.1
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 3.0e-46 189.1 185 57.8
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 5.2e-46 188.3 183 62.8
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.2e-45 187.2 189 59.3
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.5e-45 186.8 133 73.7
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 5.7e-45 184.9 191 58.6
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 5.7e-45 184.9 187 56.1
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 7.5e-45 184.5 181 58.0
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 2.2e-44 183.0 190 60.5
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 3.7e-44 182.2 183 61.2
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 4.9e-44 181.8 192 57.8
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.3e-44 181.4 189 58.7
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 1.4e-43 180.3 182 58.8
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.4e-43 180.3 189 58.2
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 3.1e-43 179.1 189 57.7
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 4.1e-43 178.7 185 59.5
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 7.0e-43 177.9 191 58.6
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 1.6e-42 176.8 182 56.6
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 1.6e-42 176.8 181 56.9
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 1.6e-42 176.8 189 56.6
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.6e-42 176.8 196 55.1
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 2.0e-42 176.4 192 57.8
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 2.7e-42 176.0 166 60.8
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 4.5e-42 175.3 183 57.9
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 5.9e-42 174.9 177 61.6
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 1.3e-41 173.7 135 69.6
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.3e-41 173.7 191 56.0
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.7e-41 173.3 184 58.2
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.7e-41 173.3 174 58.0
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.7e-41 173.3 191 58.6
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 2.3e-41 172.9 185 58.4
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 2.3e-41 172.9 185 58.4
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 2.3e-41 172.9 185 58.4
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 2.9e-41 172.6 184 53.8
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 2.9e-41 172.6 121 76.0
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 3.8e-41 172.2 117 76.1
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 5.0e-41 171.8 175 56.0
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 6.6e-41 171.4 134 70.1
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 8.6e-41 171.0 190 56.8
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-40 170.6 128 71.9
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-40 170.6 128 71.9
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.1e-40 170.6 191 57.1
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.5e-40 170.2 190 55.8
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 2.5e-40 169.5 159 61.0
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 3.3e-40 169.1 191 57.1
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 7.2e-40 167.9 185 57.8
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 7.2e-40 167.9 143 65.7
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 9.5e-40 167.5 180 57.2
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 1.2e-39 167.2 181 56.9
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.2e-39 167.2 190 56.3
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.6e-39 166.8 122 74.6
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 1.6e-39 166.8 147 64.6
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 4.7e-39 165.2 141 68.1
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 6.1e-39 164.9 181 54.7
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 6.1e-39 164.9 186 58.6
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 6.1e-39 164.9 135 67.4
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 8.0e-39 164.5 181 55.2
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.8e-38 163.3 188 54.3
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 2.3e-38 162.9 115 73.0
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 3.0e-38 162.5 153 62.7
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 5.2e-38 161.8 151 65.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 6.8e-38 161.4 197 52.8
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 6.8e-38 161.4 137 65.7
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 8.9e-38 161.0 119 73.1
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.6e-37 159.5 186 56.5
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 2.6e-37 159.5 186 57.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 3.4e-37 159.1 135 66.7
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 7.5e-37 157.9 119 71.4
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 7.5e-37 157.9 197 55.3
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 9.8e-37 157.5 188 54.8
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.4e-35 153.7 150 62.7
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 3.5e-34 149.1 138 60.1
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 3.5e-34 149.1 164 55.5
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 4.6e-34 148.7 97 80.4
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 4.6e-34 148.7 192 52.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 4.6e-34 148.7 87 86.2
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 1.0e-33 147.5 95 78.9
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 5.0e-33 145.2 134 61.9
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.5e-32 143.7 137 62.0
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 9.5e-32 141.0 182 48.9
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.2e-31 140.6 179 48.6
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.9e-27 126.7 190 47.9
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 1.9e-27 126.7 200 45.0
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 1.9e-27 126.7 200 45.0
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 2.0e-26 123.2 191 44.5
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 2.7e-26 122.9 136 56.6
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 6.6e-25 118.2 121 56.2
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 1.9e-24 116.7 99 61.6
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.9e-24 116.7 84 75.0
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 5.6e-24 115.2 93 68.8
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 2.8e-23 112.8 150 48.7
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 1.1e-22 110.9 149 49.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-22 109.8 82 74.4
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-22 109.8 82 74.4
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 3.4e-21 105.9 119 53.8
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 9.8e-21 104.4 115 47.0
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.6e-18 97.1 91 61.5
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 4.3e-16 89.0 134 43.3
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 4.3e-16 89.0 189 37.6
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.8e-14 83.6 74 59.5
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.1e-11 74.3 80 55.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 3.2e-11 72.8 87 48.3
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 1.4e-06 57.4 69 39.1


User provided reference genes

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