Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 3.1e-173 611.7 303 100.0
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 4.1e-117 425.2 322 65.2
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 7.2e-114 414.5 312 65.4
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 5.3e-109 398.3 312 64.4
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 6.1e-105 384.8 314 60.5
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 8.0e-105 384.4 314 60.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.7e-102 376.7 316 59.8
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.7e-102 376.7 313 59.1
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 2.2e-102 376.3 314 59.9
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 3.7e-102 375.6 323 60.1
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 6.3e-102 374.8 314 59.6
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 3.1e-101 372.5 314 59.9
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 3.5e-100 369.0 315 58.1
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 7.2e-98 361.3 308 59.1
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.3e-96 356.3 315 56.5
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 6.8e-96 354.8 312 58.0
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 3.4e-95 352.4 318 57.5
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 9.8e-95 350.9 315 56.5
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 1.3e-94 350.5 307 58.3
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 6.3e-94 348.2 318 55.7
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.4e-93 346.3 322 54.0
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.0e-91 340.9 321 54.8
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 5.0e-91 338.6 322 54.3
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 8.6e-91 337.8 316 53.2
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.1e-90 337.4 322 55.3
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.5e-90 337.0 322 53.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 5.6e-90 335.1 365 49.6
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.2e-89 334.0 317 55.5
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 2.1e-89 333.2 319 53.9
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 3.6e-89 332.4 318 52.5
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 3.6e-89 332.4 314 54.8
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.7e-89 332.0 317 55.2
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 1.4e-88 330.5 312 53.5
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.0e-88 328.9 312 55.4
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 8.9e-88 327.8 318 52.8
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 3.4e-87 325.9 312 55.1
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 3.4e-87 325.9 307 55.4
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 4.4e-87 325.5 312 51.3
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 5.7e-87 325.1 317 53.0
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.7e-86 323.6 322 52.5
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.7e-86 323.6 308 53.9
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 2.2e-86 323.2 314 54.8
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 1.1e-85 320.9 314 51.3
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.4e-85 319.7 315 54.6
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.2e-84 317.4 315 52.7
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.0e-84 316.6 312 53.5
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 2.0e-84 316.6 309 53.1
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.7e-83 313.5 311 51.8
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 2.3e-83 313.2 317 53.3
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.3e-83 313.2 317 50.8
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.0e-83 312.8 320 50.6
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 3.0e-83 312.8 311 52.7
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 3.9e-83 312.4 316 52.5
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 5.0e-83 312.0 309 52.4
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 6.6e-83 311.6 318 51.6
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.1e-82 310.8 318 50.9
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.1e-82 310.8 309 51.8
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 1.9e-82 310.1 320 52.5
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.8e-81 306.2 307 53.7
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 2.8e-81 306.2 317 50.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.5e-79 300.4 311 48.2
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 1.5e-79 300.4 320 49.1
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 2.0e-79 300.1 317 49.5
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.6e-79 299.7 309 48.5
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 4.4e-79 298.9 316 50.9
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 1.7e-78 297.0 314 49.4
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.9e-78 296.2 312 48.1
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 8.3e-78 294.7 318 50.3
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 7.0e-77 291.6 310 48.7
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 9.2e-77 291.2 309 47.6
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.0e-76 290.0 314 50.3
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.7e-76 289.7 308 48.4
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 7.8e-76 288.1 314 48.4
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.3e-75 287.3 312 47.1
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 5.0e-75 285.4 312 47.4
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 5.0e-75 285.4 311 46.9
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 6.6e-75 285.0 305 50.5
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 8.6e-75 284.6 322 49.7
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.5e-74 283.9 306 46.4
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 4.3e-74 282.3 304 46.7
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.6e-73 280.4 316 47.8
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.0e-72 275.8 392 43.1
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 4.4e-71 272.3 325 45.8
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 4.4e-71 272.3 329 46.5
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 7.5e-71 271.6 329 46.8
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.7e-70 270.4 269 50.9
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 4.1e-69 265.8 308 48.4
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.5e-68 262.7 436 38.8
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 6.0e-68 261.9 319 45.1
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 1.9e-66 256.9 303 48.5
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 4.7e-65 252.3 218 56.4
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 8.1e-65 251.5 322 42.9
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.4e-64 250.8 235 54.5
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 6.8e-64 248.4 311 43.7
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.6e-63 246.5 228 56.6
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 6.4e-62 241.9 281 47.3
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.1e-61 241.1 263 45.6
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.4e-61 240.7 233 53.2
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 3.2e-61 239.6 276 46.4
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 3.5e-60 236.1 265 47.9
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.3e-59 234.2 313 43.8
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.3e-59 234.2 256 50.4
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 3.0e-59 233.0 339 41.3
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 8.7e-59 231.5 336 42.0
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 1.1e-56 224.6 322 41.3
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.2e-55 221.1 257 45.1
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 3.4e-55 219.5 248 44.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 3.8e-54 216.1 298 40.9
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 2.7e-52 209.9 334 37.7
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.1e-51 205.7 291 43.3
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.1e-50 204.5 163 58.9
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 4.3e-50 202.6 278 42.1
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.9e-48 195.3 390 35.1
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 9.0e-48 194.9 320 34.7
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.5e-47 194.1 306 37.3
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.5e-47 194.1 324 38.3
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 4.9e-46 189.1 325 38.8
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 8.4e-46 188.3 308 36.7
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 2.8e-41 173.3 308 36.0
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 2.4e-40 170.2 195 46.7
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 2.7e-36 156.8 241 37.3
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 5.3e-32 142.5 231 39.0
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 1.3e-17 94.7 55 80.0
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 3.6e-12 76.6 67 59.7
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 6.1e-12 75.9 47 74.5
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 5.7e-10 69.3 49 67.3
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 1.1e-08 65.1 46 63.0


User provided reference genes

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