Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 9.3e-47 190.3 127 100.0
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 9.0e-34 147.1 106 91.5
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 6.5e-16 87.8 132 37.9
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.4e-15 86.7 132 37.9
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.4e-15 86.7 132 37.9
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.4e-15 86.7 134 38.8
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.2e-15 85.5 134 38.8
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 3.2e-15 85.5 134 38.8
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 4.2e-15 85.1 137 37.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 5.5e-15 84.7 71 56.3
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 5.5e-15 84.7 134 38.1
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 5.5e-15 84.7 134 38.1
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 9.4e-15 84.0 67 58.2
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.1e-14 82.8 136 37.5
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.6e-14 82.0 67 56.7
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.6e-14 82.0 134 38.8
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 6.1e-14 81.3 134 39.6
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.3e-13 79.3 133 39.1
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 5.1e-13 78.2 71 54.9
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 5.1e-13 78.2 71 54.9
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 5.1e-13 78.2 71 54.9
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.1e-12 77.0 133 38.3
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.9e-12 76.3 132 40.2
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.9e-12 76.3 133 37.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 5.7e-12 74.7 71 53.5
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 7.4e-12 74.3 133 39.8
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 7.4e-12 74.3 134 38.1
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.3e-11 73.6 132 37.1
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.7e-11 73.2 133 38.3
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 2.2e-11 72.8 67 55.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 2.2e-11 72.8 133 36.8
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.8e-11 72.4 132 37.9
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.8e-11 72.4 132 37.9
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 2.8e-11 72.4 133 36.8
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 2.8e-11 72.4 132 37.1
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 3.7e-11 72.0 137 37.2
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 3.7e-11 72.0 132 37.9
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 3.7e-11 72.0 71 50.7
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 4.8e-11 71.6 132 36.4
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 4.8e-11 71.6 132 37.1
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 6.3e-11 71.2 67 50.7
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 6.3e-11 71.2 132 37.1
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 6.3e-11 71.2 133 36.1
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 8.2e-11 70.9 132 34.8
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 8.2e-11 70.9 63 57.1
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.1e-10 70.5 132 39.4
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.4e-10 70.1 133 39.1
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.8e-10 69.7 71 50.7
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.8e-10 69.7 71 53.5
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 1.8e-10 69.7 135 37.0
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.8e-10 69.7 71 53.5
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.8e-10 69.7 71 53.5
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.8e-10 69.7 71 53.5
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.4e-10 69.3 67 53.7
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.4e-10 69.3 67 53.7
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 2.4e-10 69.3 67 56.7
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.4e-10 69.3 132 36.4
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 2.4e-10 69.3 71 52.1
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 3.1e-10 68.9 138 34.8
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.1e-10 68.9 71 49.3
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.1e-10 68.6 71 50.7
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 4.1e-10 68.6 132 34.1
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 4.1e-10 68.6 70 52.9
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 5.3e-10 68.2 132 36.4
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 6.9e-10 67.8 71 52.1
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 6.9e-10 67.8 71 52.1
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 6.9e-10 67.8 132 35.6
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 6.9e-10 67.8 132 35.6
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 6.9e-10 67.8 71 52.1
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 6.9e-10 67.8 67 55.2
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 6.9e-10 67.8 71 50.7
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 6.9e-10 67.8 71 50.7
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 9.1e-10 67.4 136 36.0
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 9.1e-10 67.4 136 36.0
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 9.1e-10 67.4 132 35.6
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 9.1e-10 67.4 132 35.6
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 9.1e-10 67.4 136 36.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.2e-09 67.0 126 35.7
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.2e-09 67.0 119 36.1
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.2e-09 67.0 136 36.0
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.5e-09 66.6 132 34.8
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.5e-09 66.6 132 37.1
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.5e-09 66.6 134 38.1
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.5e-09 66.6 71 52.1
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 2.0e-09 66.2 134 35.1
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.0e-09 66.2 71 52.1
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 2.0e-09 66.2 71 50.7
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 2.6e-09 65.9 134 34.3
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.6e-09 65.9 132 36.4
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.6e-09 65.9 71 52.1
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.6e-09 65.9 126 35.7
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 3.4e-09 65.5 72 50.0
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 3.4e-09 65.5 136 33.1
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 4.5e-09 65.1 135 35.6
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 4.5e-09 65.1 70 50.0
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 4.5e-09 65.1 70 50.0
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 4.5e-09 65.1 71 49.3
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 4.5e-09 65.1 133 33.8
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 4.5e-09 65.1 133 52.6
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 4.5e-09 65.1 71 49.3
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.7e-09 64.3 67 50.7
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 7.7e-09 64.3 67 50.7
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 7.7e-09 64.3 132 34.1
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 7.7e-09 64.3 67 53.7
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.0e-08 63.9 70 48.6
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 1.0e-08 63.9 63 52.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.3e-08 63.5 71 47.9
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.7e-08 63.2 132 33.3
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.2e-08 62.8 67 50.7
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.9e-08 62.4 131 36.6
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 8.5e-08 60.8 67 47.8
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.1e-07 60.5 71 43.7
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.1e-07 60.5 63 49.2
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.4e-07 60.1 59 47.5
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.9e-07 59.7 49 49.0
SGA_v2.0_scaffold163G38077 Striga asiatica HOM05D006197 ORTHO05D007718 2.5e-07 59.3 65 46.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.5e-07 59.3 73 47.9
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 4.2e-07 58.5 55 54.5
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.2e-06 57.0 70 47.1
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 4.7e-06 55.1 56 50.0
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 7.9e-06 54.3 54 50.0


User provided reference genes

Program Settings