Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 4.1e-93 344.7 179 100.0
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 7.4e-66 254.2 165 80.6
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.1e-65 252.7 165 80.6
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 4.0e-64 248.4 171 78.4
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 6.9e-64 247.7 165 79.4
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.9e-62 242.3 165 77.6
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.5e-61 239.2 165 77.6
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 3.2e-61 238.8 165 78.8
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 5.5e-61 238.0 165 76.4
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 5.5e-61 238.0 165 78.8
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.5e-60 235.3 165 78.2
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.8e-59 233.0 162 77.2
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.3e-59 232.6 147 85.7
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 3.9e-59 231.9 165 75.2
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.9e-59 231.9 168 75.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 5.1e-59 231.5 172 73.3
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 8.7e-59 230.7 141 85.1
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 8.7e-59 230.7 163 78.5
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 8.7e-59 230.7 162 79.6
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.9e-58 229.6 162 74.7
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.9e-58 229.6 166 74.7
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 3.3e-58 228.8 161 78.3
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 3.3e-58 228.8 166 74.1
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.3e-58 228.4 161 78.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.3e-58 228.4 161 78.3
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 4.3e-58 228.4 165 74.5
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 5.7e-58 228.0 168 74.4
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 5.7e-58 228.0 162 75.3
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 5.7e-58 228.0 167 73.7
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 9.6e-58 227.3 162 77.2
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 9.6e-58 227.3 140 85.0
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 9.6e-58 227.3 169 74.6
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.3e-57 226.9 164 74.4
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.3e-57 226.9 143 83.2
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.6e-57 226.5 146 81.5
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.6e-57 226.5 164 75.0
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.1e-57 226.1 154 79.2
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 2.8e-57 225.7 167 73.1
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 2.8e-57 225.7 162 74.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 3.7e-57 225.3 188 70.2
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.7e-57 225.3 145 83.4
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 3.7e-57 225.3 165 72.7
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 4.8e-57 224.9 166 72.9
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 4.8e-57 224.9 161 75.8
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 6.2e-57 224.6 166 72.9
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 8.2e-57 224.2 177 70.1
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.4e-56 223.4 166 73.5
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.4e-56 223.4 161 77.6
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.8e-56 223.0 142 82.4
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.8e-56 223.0 164 74.4
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.8e-56 223.0 164 73.2
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.4e-56 222.6 180 67.8
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.4e-56 222.6 164 73.8
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.1e-56 222.2 173 70.5
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.9e-56 221.1 173 69.9
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 6.9e-56 221.1 164 74.4
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 9.0e-56 220.7 172 68.0
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.2e-55 220.3 165 74.5
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.2e-55 220.3 166 72.3
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.2e-55 220.3 162 75.3
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.2e-55 220.3 154 74.7
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.5e-55 219.9 139 81.3
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.5e-55 219.9 148 80.4
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.5e-55 219.9 140 83.6
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.0e-55 219.5 173 69.4
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.0e-55 219.5 165 73.3
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 2.0e-55 219.5 179 68.7
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 2.6e-55 219.2 152 75.7
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 3.4e-55 218.8 139 80.6
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 3.4e-55 218.8 165 72.1
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 4.5e-55 218.4 164 73.2
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 4.5e-55 218.4 180 68.3
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 4.5e-55 218.4 166 73.5
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.5e-55 218.4 161 72.0
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 5.8e-55 218.0 145 79.3
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 7.6e-55 217.6 139 84.2
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 7.6e-55 217.6 141 81.6
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.3e-54 216.9 139 79.9
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.3e-54 216.9 149 79.2
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.3e-54 216.9 164 72.0
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.7e-54 216.5 162 71.6
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 2.2e-54 216.1 164 73.2
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 2.2e-54 216.1 139 81.3
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.9e-54 215.7 139 80.6
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.9e-54 215.7 169 71.6
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.8e-54 215.3 146 79.5
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 8.4e-54 214.2 151 77.5
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-53 213.4 145 79.3
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-53 213.4 145 79.3
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 1.4e-53 213.4 145 79.3
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-53 213.4 145 79.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 2.5e-53 212.6 170 68.8
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.5e-53 212.6 159 71.7
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.5e-53 212.6 159 71.7
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.5e-53 212.6 159 71.7
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 2.5e-53 212.6 168 68.5
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 3.2e-53 212.2 165 70.9
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.2e-53 212.2 163 71.8
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.2e-53 211.8 134 82.1
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 9.3e-53 210.7 186 66.1
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 9.3e-53 210.7 144 77.1
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 9.3e-53 210.7 141 78.0
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 9.3e-53 210.7 161 74.5
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 9.3e-53 210.7 165 70.9
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.2e-52 210.3 142 76.1
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.6e-52 209.9 177 68.4
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.1e-52 209.5 137 79.6
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 2.1e-52 209.5 148 74.3
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.1e-52 209.5 176 64.8
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.7e-52 209.1 175 66.3
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 3.5e-52 208.8 139 77.7
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 3.0e-51 205.7 151 74.2
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 3.9e-51 205.3 139 79.9
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 6.7e-51 204.5 170 65.9
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.5e-50 203.4 163 66.9
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.5e-50 203.4 159 69.8
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 2.5e-50 202.6 165 66.7
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.6e-49 199.9 141 75.2
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.6e-49 199.9 113 90.3
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.6e-49 199.9 180 63.9
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.2e-49 199.5 115 88.7
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 2.2e-49 199.5 115 88.7
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 6.3e-49 198.0 115 87.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 6.3e-49 198.0 145 72.4
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.8e-48 196.4 115 88.7
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.4e-48 196.1 140 73.6
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 3.1e-48 195.7 163 66.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 5.3e-48 194.9 143 74.8
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.5e-47 193.4 113 86.7
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.5e-47 193.4 165 64.2
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 4.5e-47 191.8 203 56.2
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 7.7e-47 191.0 112 87.5
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 2.7e-44 182.6 139 64.0
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.0e-43 180.6 143 63.6
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.0e-43 180.6 162 66.0
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.8e-43 179.9 145 65.5
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 8.8e-43 177.6 173 60.7
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.5e-42 176.8 168 61.3
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 3.3e-42 175.6 165 63.0
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 5.7e-42 174.9 109 77.1
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 9.7e-42 174.1 144 69.4
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 9.7e-42 174.1 113 81.4
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 2.2e-41 172.9 111 80.2
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.7e-41 172.2 142 64.1
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 8.2e-41 171.0 141 63.8
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.4e-40 169.5 167 59.9
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.4e-40 169.5 167 59.9
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 2.9e-38 162.5 111 71.2
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.4e-37 160.2 113 69.9
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 3.6e-36 155.6 120 70.0
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 7.9e-36 154.5 157 59.9
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 3.0e-35 152.5 317 36.6
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 8.8e-35 151.0 163 56.4
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 6.3e-33 144.8 130 59.2
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.5e-29 133.7 132 62.9
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.3e-26 122.5 109 55.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.7e-25 120.2 141 48.9
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.6e-23 112.8 93 69.9
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 3.5e-23 112.5 78 76.9
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.9e-22 109.4 91 64.8
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-21 107.5 99 62.6
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-21 107.5 86 66.3
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 4.2e-21 105.5 87 67.8
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.7e-20 102.8 87 66.7
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.7e-20 102.8 87 66.7
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.6e-15 87.0 107 50.5
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 8.5e-14 81.3 49 81.6
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 8.5e-14 81.3 47 83.0
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 7.2e-13 78.2 44 90.9
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 8.3e-09 64.7 38 84.2


User provided reference genes

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