Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 4.0e-271 937.6 498 100.0
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 5.9e-190 667.9 499 73.1
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.0e-178 628.6 497 67.6
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 7.1e-175 617.8 496 66.3
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.3e-173 613.6 498 66.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 5.1e-173 611.7 499 68.7
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 8.6e-173 610.9 500 64.8
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 4.7e-171 605.1 496 65.1
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 3.1e-170 602.4 500 63.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 6.8e-170 601.3 512 65.8
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 2.6e-169 599.4 507 63.5
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.9e-169 597.4 504 65.1
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-168 595.5 500 63.6
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-168 595.5 500 63.6
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 8.4e-168 594.3 496 63.5
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.2e-166 590.5 495 64.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.6e-166 590.1 496 64.5
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.6e-166 590.1 499 62.9
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 7.8e-166 587.8 500 63.6
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.3e-165 586.3 503 62.8
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 5.1e-165 585.1 495 64.8
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 6.6e-165 584.7 496 63.7
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 3.3e-164 582.4 497 62.6
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 5.6e-164 581.6 499 63.3
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.2e-163 580.5 496 63.1
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 3.6e-163 578.9 497 64.6
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 4.7e-163 578.6 501 62.7
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 6.2e-163 578.2 500 62.0
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.4e-162 576.2 502 62.9
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 4.0e-162 575.5 496 63.9
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 5.2e-162 575.1 496 63.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 1.5e-161 573.5 502 62.2
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.2e-160 569.7 495 62.8
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 2.2e-160 569.7 500 61.4
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.4e-159 567.0 502 63.5
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.4e-159 567.0 500 62.6
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.9e-159 566.6 503 62.0
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.4e-159 566.2 506 61.9
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.2e-159 565.8 497 63.2
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 5.4e-159 565.1 504 63.3
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.7e-158 562.8 501 61.7
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.7e-158 562.8 502 63.1
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 4.6e-158 562.0 504 60.7
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.0e-157 560.8 495 61.8
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 3.9e-157 558.9 497 61.8
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 5.1e-157 558.5 496 61.3
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.5e-156 557.0 500 62.6
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 7.3e-156 554.7 496 62.1
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.3e-155 553.9 513 58.3
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.8e-155 552.7 513 60.4
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 8.1e-155 551.2 495 63.0
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.4e-154 550.4 500 61.8
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 2.4e-154 549.7 501 60.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 6.9e-154 548.1 526 57.8
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 9.0e-154 547.7 500 61.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.3e-152 543.9 486 61.5
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 6.4e-152 541.6 520 58.7
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 2.4e-151 539.7 509 59.7
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.1e-150 536.6 504 60.5
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.3e-149 533.9 500 60.4
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.7e-149 533.5 509 56.0
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 6.6e-149 531.6 515 58.1
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.1e-148 530.8 531 57.6
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 9.6e-148 527.7 511 56.8
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 1.6e-147 526.9 526 59.5
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 4.8e-147 525.4 550 55.1
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.8e-146 523.5 516 58.5
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 3.4e-145 519.2 517 59.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.9e-144 516.2 508 58.5
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 4.2e-143 512.3 509 56.0
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 7.1e-143 511.5 498 59.4
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 3.9e-141 505.8 510 57.3
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.9e-140 503.4 505 56.6
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.5e-140 503.1 505 54.9
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.5e-140 503.1 513 56.5
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 7.4e-140 501.5 506 54.9
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 4.0e-138 495.7 512 54.9
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.2e-137 494.2 524 55.9
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.5e-137 493.8 511 54.6
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.0e-136 491.1 509 56.4
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.9e-135 486.9 500 58.0
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.1e-134 483.4 541 54.2
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 3.5e-134 482.6 504 55.4
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.8e-133 480.3 508 55.5
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 2.3e-133 479.9 506 53.8
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 5.7e-132 475.3 394 62.2
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.6e-131 473.8 506 54.0
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 3.7e-131 472.6 506 53.8
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 4.1e-130 469.2 506 54.2
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 6.7e-125 451.8 496 53.0
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.8e-123 445.7 505 54.5
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 7.7e-121 438.3 513 52.2
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.6e-118 430.6 342 63.2
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 8.2e-115 418.3 366 65.0
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 3.8e-104 382.9 361 59.0
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.1e-103 381.3 520 43.1
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.3e-101 373.6 333 62.2
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 3.6e-94 349.7 513 40.9
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.7e-88 330.9 501 40.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 9.4e-87 325.1 581 38.7
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.8e-83 313.5 355 54.9
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 3.4e-68 263.5 187 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.4e-58 231.5 369 43.6
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.3e-56 224.9 564 33.9
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 7.3e-47 192.6 187 60.4
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.2e-41 175.3 142 64.1
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.9e-26 124.8 106 56.6
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.1e-25 121.3 310 33.5
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 3.8e-19 100.5 148 42.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 8.7e-16 89.4 359 27.9
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 1.9e-07 61.6 79 45.6
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 3.3e-07 60.8 65 47.7
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 1.3e-06 58.9 90 40.0
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 1.6e-06 58.5 84 42.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 2.2e-06 58.2 71 43.7
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.2e-06 58.2 43 72.1
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 3.7e-06 57.4 60 46.7
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 4.8e-06 57.0 255 27.8
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 55.1
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 8.2e-06 56.2 46 56.5
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 8.2e-06 56.2 55 47.3


User provided reference genes

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