Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 2.8e-62 241.9 134 100.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.1e-41 172.6 134 76.9
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.8e-41 172.2 132 77.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.3e-40 169.1 140 75.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 5.2e-40 167.9 134 74.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.6e-33 146.4 149 65.1
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.0e-32 143.7 150 64.7
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.8e-32 142.9 103 83.5
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 3.1e-32 142.1 105 77.1
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.2e-32 141.4 103 79.6
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.2e-32 141.4 105 81.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.2e-32 141.4 105 81.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 5.2e-32 141.4 147 64.6
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 8.9e-32 140.6 107 81.3
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.2e-31 140.2 137 64.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.5e-31 139.8 111 77.5
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-31 139.0 106 76.4
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-31 139.0 106 76.4
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-31 139.0 106 78.3
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.6e-31 139.0 106 78.3
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 4.4e-31 138.3 105 73.3
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 4.4e-31 138.3 105 80.0
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 5.8e-31 137.9 106 80.2
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.8e-31 137.9 104 79.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 7.5e-31 137.5 99 84.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 7.5e-31 137.5 146 62.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 9.8e-31 137.1 149 62.4
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.3e-30 136.7 108 78.7
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.3e-30 136.7 108 78.7
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.3e-30 136.7 150 63.3
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.7e-30 136.3 100 79.0
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.7e-30 136.3 102 82.4
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.2e-30 136.0 100 83.0
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.9e-30 135.6 106 74.5
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 2.9e-30 135.6 100 82.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 3.7e-30 135.2 107 78.5
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 3.7e-30 135.2 137 63.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 3.7e-30 135.2 117 71.8
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 4.9e-30 134.8 100 81.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 4.9e-30 134.8 114 74.6
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 6.4e-30 134.4 107 78.5
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 6.4e-30 134.4 107 78.5
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 6.4e-30 134.4 107 78.5
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 6.4e-30 134.4 100 84.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 6.4e-30 134.4 100 78.0
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 6.4e-30 134.4 104 82.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 6.4e-30 134.4 105 77.1
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 6.4e-30 134.4 100 81.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 8.3e-30 134.0 100 83.0
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.1e-29 133.7 110 75.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-29 133.7 99 83.8
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 1.1e-29 133.7 121 67.8
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 1.1e-29 133.7 139 61.9
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.1e-29 133.7 107 77.6
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.4e-29 133.3 103 80.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.9e-29 132.9 107 77.6
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.9e-29 132.9 107 77.6
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.4e-29 132.5 104 59.6
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.4e-29 132.5 108 75.9
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 3.2e-29 132.1 137 62.0
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 5.4e-29 131.3 138 61.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 7.0e-29 131.0 100 79.0
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 9.2e-29 130.6 102 78.4
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 9.2e-29 130.6 102 78.4
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 9.2e-29 130.6 121 71.1
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.2e-28 130.2 153 57.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.6e-28 129.8 98 79.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.6e-28 129.8 104 72.1
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.0e-28 129.4 101 73.3
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.7e-28 129.0 118 71.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.5e-28 128.6 98 79.6
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.5e-28 128.6 145 61.4
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.5e-28 128.6 120 65.0
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.6e-28 128.3 139 60.4
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 4.6e-28 128.3 123 67.5
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 6.0e-28 127.9 109 71.6
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 7.8e-28 127.5 97 79.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.0e-27 127.1 103 72.8
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-27 126.7 118 70.3
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.3e-27 126.7 106 73.6
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-27 126.3 119 66.4
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.7e-27 126.3 146 60.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 3.0e-27 125.6 138 60.9
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 3.0e-27 125.6 99 74.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 5.0e-27 124.8 119 65.5
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.1e-26 123.6 87 85.1
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.3e-26 122.1 127 61.4
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 4.3e-26 121.7 133 59.4
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 5.6e-26 121.3 104 73.1
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 7.3e-26 120.9 101 71.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 9.5e-26 120.6 75 72.0
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 9.5e-26 120.6 88 80.7
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 4.7e-25 118.2 104 72.1
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 8.1e-25 117.5 177 51.4
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.1e-24 115.5 75 68.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.5e-23 113.2 85 83.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 2.6e-23 112.5 88 76.1
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 7.5e-23 110.9 85 77.6
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 7.5e-23 110.9 74 90.5
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.4e-21 106.7 77 83.1
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 3.2e-21 105.5 85 71.8
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.1e-20 102.8 136 50.7
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 6.0e-20 101.3 73 83.6
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.7e-19 99.8 73 79.5
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.4e-08 63.5 46 65.2


User provided reference genes

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