Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 9.7e-89 330.1 165 100.0
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 4.9e-64 248.1 149 79.2
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 7.0e-63 244.2 148 78.4
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.6e-62 241.5 146 78.1
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 1.0e-61 240.4 148 77.0
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 1.6e-59 233.0 146 76.0
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 1.6e-59 233.0 148 73.6
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 3.6e-59 231.9 148 78.4
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 3.6e-59 231.9 146 77.4
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.4e-58 229.9 148 75.0
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.8e-58 229.6 148 71.6
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.8e-58 229.6 148 71.6
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 1.8e-58 229.6 168 70.2
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 3.1e-58 228.8 148 74.3
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 6.8e-58 227.6 148 71.6
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 6.8e-58 227.6 148 72.3
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 8.9e-58 227.3 148 73.6
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 1.2e-57 226.9 165 68.5
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.5e-57 226.5 147 70.7
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.5e-57 226.5 146 75.3
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 2.0e-57 226.1 148 71.6
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.0e-57 226.1 148 72.3
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 3.4e-57 225.3 148 70.9
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 3.4e-57 225.3 148 70.9
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 7.5e-57 224.2 148 71.6
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 7.5e-57 224.2 149 73.2
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 9.8e-57 223.8 148 70.9
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 1.7e-56 223.0 148 69.6
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 1.7e-56 223.0 148 70.9
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 2.2e-56 222.6 146 75.3
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 3.7e-56 221.9 148 69.6
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 4.9e-56 221.5 148 69.6
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 6.4e-56 221.1 136 76.5
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 6.4e-56 221.1 146 74.0
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 8.3e-56 220.7 148 71.6
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 8.3e-56 220.7 148 67.6
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.4e-55 219.9 144 71.5
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 1.4e-55 219.9 148 69.6
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 1.9e-55 219.5 145 73.1
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.4e-55 219.2 148 72.3
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 2.4e-55 219.2 148 69.6
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 3.2e-55 218.8 148 70.3
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 9.2e-55 217.2 173 64.7
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 1.6e-54 216.5 148 68.9
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 4.6e-54 214.9 148 70.9
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 4.6e-54 214.9 158 63.3
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 4.6e-54 214.9 148 70.3
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.6e-54 214.9 172 62.2
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 6.0e-54 214.5 154 68.8
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 7.8e-54 214.2 213 54.5
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.0e-53 213.8 150 69.3
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.0e-53 213.8 172 61.6
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 1.0e-53 213.8 148 71.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.3e-53 212.6 148 68.2
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 2.3e-53 212.6 149 71.1
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 3.0e-53 212.2 148 68.2
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 3.9e-53 211.8 148 70.9
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 6.6e-53 211.1 148 65.5
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 8.6e-53 210.7 146 66.4
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 1.5e-52 209.9 145 66.2
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 1.9e-52 209.5 148 64.9
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 3.3e-52 208.8 149 67.1
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 3.3e-52 208.8 148 64.9
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 5.6e-52 208.0 146 65.8
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 1.2e-51 206.8 148 64.9
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 1.2e-51 206.8 151 66.2
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 1.2e-51 206.8 149 68.5
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 8.1e-51 204.1 158 62.7
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 4.0e-50 201.8 154 62.3
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 4.0e-50 201.8 148 61.5
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 6.8e-50 201.1 148 66.2
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 6.8e-50 201.1 148 66.2
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 6.8e-50 201.1 148 62.8
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 8.9e-50 200.7 148 60.8
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 1.5e-49 199.9 148 61.5
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 2.0e-49 199.5 148 62.2
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 2.0e-49 199.5 174 60.3
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.6e-49 199.1 186 55.4
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 7.5e-49 197.6 148 60.8
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.3e-48 196.8 169 56.8
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 3.7e-48 195.3 141 63.1
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 8.3e-48 194.1 134 68.7
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 1.4e-47 193.4 149 60.4
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 1.4e-47 193.4 131 71.8
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.9e-47 193.0 152 58.6
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 3.2e-47 192.2 148 58.1
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 3.2e-47 192.2 144 60.4
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 4.1e-47 191.8 149 59.7
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 9.2e-47 190.7 147 64.6
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 6.0e-46 188.0 149 58.4
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.3e-45 186.0 120 72.5
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 1.4e-42 176.8 124 69.4
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 4.0e-42 175.3 145 55.9
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 2.2e-40 169.5 111 75.7
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 3.0e-37 159.1 99 76.8
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.8e-34 149.8 93 76.3
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 1.3e-32 143.7 117 56.4
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 1.0e-29 134.0 104 64.4
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 1.7e-29 133.3 148 50.7
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 6.2e-27 124.8 101 56.4
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.6e-22 110.2 83 63.9
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 6.0e-22 108.2 64 79.7
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 1.0e-21 107.5 145 33.8
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.3e-21 107.1 65 76.9
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.5e-20 102.8 66 74.2
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 9.0e-18 94.4 122 48.4
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 2.0e-17 93.2 145 33.1
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 8.4e-16 87.8 103 47.6
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.6e-14 83.6 77 53.2
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 3.0e-13 79.3 140 30.0
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.1e-12 77.4 45 71.1
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 1.5e-12 77.0 66 60.6
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 1.4e-10 70.5 67 49.3
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 8.4e-08 61.2 44 68.2
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.4e-07 60.5 38 71.1


User provided reference genes

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