Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 4.1e-92 341.3 160 100.0
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 2.2e-53 212.6 134 75.4
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 6.4e-53 211.1 152 69.1
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 4.1e-52 208.4 129 76.0
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 4.7e-48 194.9 148 62.2
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 8.1e-48 194.1 148 61.5
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 1.8e-47 193.0 131 71.0
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 2.4e-47 192.6 150 60.7
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 4.0e-47 191.8 148 60.8
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 5.2e-47 191.4 152 61.2
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 2.6e-46 189.1 134 67.2
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 7.6e-46 187.6 156 58.3
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 9.9e-46 187.2 102 78.4
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 1.3e-45 186.8 110 73.6
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 4.9e-45 184.9 144 62.5
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 6.4e-45 184.5 138 65.2
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.4e-44 183.3 129 65.1
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 1.9e-44 183.0 109 75.2
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 1.9e-44 183.0 101 78.2
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 5.4e-44 181.4 124 68.5
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 2.7e-43 179.1 111 71.2
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 4.6e-43 178.3 107 73.8
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 6.0e-43 177.9 104 76.9
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 1.3e-42 176.8 107 72.9
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 2.3e-42 176.0 111 71.2
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 2.3e-42 176.0 102 77.5
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 3.0e-42 175.6 117 67.5
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 3.9e-42 175.3 104 76.0
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 3.9e-42 175.3 104 76.0
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 3.9e-42 175.3 143 60.8
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 5.1e-42 174.9 135 63.7
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 6.6e-42 174.5 100 79.0
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 8.7e-42 174.1 112 70.5
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.1e-41 173.7 123 65.9
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 1.1e-41 173.7 104 76.9
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 1.1e-41 173.7 125 66.4
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 2.5e-41 172.6 139 60.4
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 2.5e-41 172.6 135 62.2
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 4.3e-41 171.8 132 60.6
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 4.3e-41 171.8 104 74.0
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 5.6e-41 171.4 113 69.0
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 5.6e-41 171.4 152 56.6
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 5.6e-41 171.4 123 65.9
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 7.3e-41 171.0 111 69.4
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 7.3e-41 171.0 158 57.0
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 7.3e-41 171.0 109 71.6
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 1.2e-40 170.2 104 72.1
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 1.2e-40 170.2 107 72.9
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 1.6e-40 169.9 123 64.2
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 1.6e-40 169.9 134 64.9
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 1.6e-40 169.9 154 56.5
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 1.6e-40 169.9 159 58.5
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 1.6e-40 169.9 123 61.8
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 3.6e-40 168.7 107 72.0
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 4.7e-40 168.3 107 73.8
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 8.1e-40 167.5 108 68.5
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 6.9e-39 164.5 130 58.5
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 2.0e-38 162.9 137 57.7
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 2.6e-38 162.5 132 58.3
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 3.4e-38 162.2 130 59.2
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 3.4e-38 162.2 146 54.8
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 4.4e-38 161.8 102 68.6
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 5.8e-38 161.4 130 59.2
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 7.6e-38 161.0 123 64.2
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 9.9e-38 160.6 123 62.6
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 1.3e-37 160.2 110 67.3
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 1.7e-37 159.8 104 70.2
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 2.2e-37 159.5 130 59.2
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.2e-37 159.5 102 70.6
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.2e-37 159.5 102 70.6
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 4.9e-37 158.3 127 60.6
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 1.1e-36 157.1 107 64.5
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 1.1e-36 157.1 107 64.5
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 1.1e-36 157.1 107 64.5
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.1e-36 157.1 102 68.6
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 1.4e-36 156.8 107 66.4
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 1.4e-36 156.8 102 67.6
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 1.4e-36 156.8 126 58.7
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 2.4e-36 156.0 107 65.4
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 7.1e-36 154.5 134 56.0
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 3.5e-35 152.1 102 66.7
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.6e-35 151.8 134 56.0
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 1.3e-34 150.2 178 46.6
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 5.6e-33 144.8 114 64.0
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 3.6e-32 142.1 96 68.8
Rhsim11G0036100 Rhododendron simsii HOM05D007132 ORTHO05D009120 3.1e-31 139.0 106 66.0
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 4.0e-31 138.7 107 57.9
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 8.4e-29 131.0 85 63.5
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 2.1e-24 116.3 103 56.3
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 2.8e-24 115.9 83 59.0
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 4.9e-21 105.1 59 74.6
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 1.9e-17 93.2 59 66.1
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 3.3e-17 92.4 58 69.0
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 7.4e-17 91.3 59 61.0
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 2.1e-16 89.7 96 45.8
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 4.8e-16 88.6 58 65.5
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 6.2e-16 88.2 59 61.0
Lalb_Chr05g0215031 Lupinus albus HOM05D007132 ORTHO05D009120 1.5e-14 83.6 60 63.3
Psat2g145800 Pisum sativum HOM05D007132 ORTHO05D009120 3.8e-13 79.0 52 71.2
Haze_08440 Corylus avellana HOM05D000433 ORTHO05D000443 8.4e-13 77.8 50 72.0
Medtr5g032230 Medicago truncatula HOM05D007132 ORTHO05D009120 2.5e-12 76.3 100 45.0
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 1.6e-11 73.6 48 62.5
Rhsim11G0036200 Rhododendron simsii HOM05D007132 ORTHO05D009120 3.3e-09 65.9 71 52.1
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.7e-08 62.4 52 55.8
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 1.8e-07 60.1 79 36.7
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 2.4e-07 59.7 41 63.4


User provided reference genes

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