Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01363 Erythranthe guttata HOM05D000595 ORTHO05D004141 2.6e-126 455.3 216 100.0
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.8e-95 352.8 218 80.3
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 3.8e-85 318.5 219 71.7
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 4.2e-84 315.1 219 69.9
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 2.6e-81 305.8 219 68.9
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 2.8e-80 302.4 219 67.1
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 4.9e-80 301.6 217 69.1
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 8.3e-80 300.8 217 69.1
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 1.1e-79 300.4 219 67.6
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 7.7e-78 294.3 219 65.3
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 2.3e-77 292.7 219 64.8
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 2.9e-77 292.4 217 65.0
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 5.0e-77 291.6 217 66.8
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 6.6e-77 291.2 216 66.2
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 1.5e-76 290.0 213 65.3
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 1.9e-76 289.7 204 68.6
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 3.3e-76 288.9 213 65.3
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 5.6e-76 288.1 204 68.6
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 9.5e-76 287.3 219 63.9
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 2.8e-75 285.8 220 64.1
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 6.1e-75 284.6 219 64.4
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 8.0e-75 284.3 221 62.4
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 1.0e-74 283.9 220 63.6
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 1.4e-74 283.5 209 65.1
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 1.4e-74 283.5 215 63.3
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 1.4e-74 283.5 213 64.3
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 3.0e-74 282.3 215 65.6
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 8.9e-74 280.8 219 63.5
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 8.9e-74 280.8 219 63.5
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 1.5e-73 280.0 216 63.9
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 1.5e-73 280.0 221 62.9
Thecc.10G189800 Theobroma cacao HOM05D000595 ORTHO05D004141 2.0e-73 279.6 219 61.6
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 2.6e-73 279.3 227 63.0
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 2.6e-73 279.3 219 63.0
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 4.4e-73 278.5 219 63.0
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 7.5e-73 277.7 215 63.3
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 7.5e-73 277.7 202 65.8
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 9.8e-73 277.3 215 63.3
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 9.8e-73 277.3 219 61.2
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 2.9e-72 275.8 219 63.0
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.9e-72 275.8 202 65.3
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.7e-72 275.4 204 66.7
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 3.7e-72 275.4 217 62.7
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 6.4e-72 274.6 202 65.8
Haze_07995 Corylus avellana HOM05D000595 ORTHO05D004141 8.3e-72 274.2 219 63.0
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 8.3e-72 274.2 219 61.6
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 1.4e-71 273.5 202 65.3
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.4e-71 273.5 209 64.1
HPP92_028113 Vanilla planifolia HOM05D000595 ORTHO05D004141 1.4e-71 273.5 209 63.6
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.8e-71 273.1 214 63.6
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 1.8e-71 273.1 204 65.7
Cpa.g.sc71.57 Carica papaya HOM05D000595 ORTHO05D004141 2.4e-71 272.7 219 62.6
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 2.4e-71 272.7 206 66.5
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 2.4e-71 272.7 203 65.5
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 2.4e-71 272.7 215 63.3
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 2.4e-71 272.7 202 65.3
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 3.2e-71 272.3 220 62.7
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 4.1e-71 271.9 202 65.8
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 5.4e-71 271.6 203 64.5
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 7.0e-71 271.2 203 64.5
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.2e-70 270.4 219 62.1
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 1.6e-70 270.0 202 65.8
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 1.6e-70 270.0 215 60.5
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 2.0e-70 269.6 220 61.4
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 2.0e-70 269.6 220 61.4
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 2.0e-70 269.6 205 65.4
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.7e-70 269.2 219 60.3
GSVIVG01036945001 Vitis vinifera HOM05D000595 ORTHO05D004141 4.6e-70 268.5 203 64.5
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 5.9e-70 268.1 205 63.4
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 5.9e-70 268.1 219 61.2
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 7.8e-70 267.7 208 63.9
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 7.8e-70 267.7 208 63.0
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 1.0e-69 267.3 219 62.1
Cc08_g05430 Coffea canephora HOM05D000595 ORTHO05D004141 1.0e-69 267.3 219 62.1
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 1.3e-69 266.9 205 64.4
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 1.5e-68 263.5 204 63.7
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.5e-68 263.5 203 63.5
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 1.9e-68 263.1 219 59.4
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 1.9e-68 263.1 220 59.5
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 2.5e-68 262.7 219 60.7
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 3.3e-68 262.3 219 59.4
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 3.3e-68 262.3 205 61.5
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 4.3e-68 261.9 219 58.4
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 4.3e-68 261.9 215 60.9
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 9.5e-68 260.8 217 59.4
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 9.5e-68 260.8 242 57.0
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 2.8e-67 259.2 217 59.4
Manes.17G004600 Manihot esculenta HOM05D000595 ORTHO05D004141 2.8e-67 259.2 221 58.8
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 2.8e-67 259.2 216 60.6
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 3.6e-67 258.8 204 63.2
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 3.6e-67 258.8 220 59.1
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.0e-66 257.3 216 61.1
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 1.4e-66 256.9 213 60.1
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 1.8e-66 256.5 215 58.6
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 4.0e-66 255.4 217 59.0
CAN.G1731.5 Capsicum annuum HOM05D000595 ORTHO05D004141 8.9e-66 254.2 187 66.8
VMungo1215G1352 Vigna mungo HOM05D000595 ORTHO05D004141 8.9e-66 254.2 201 64.7
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.5e-65 253.4 201 63.7
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 2.6e-65 252.7 200 62.0
Oeu042228.5 Olea europaea HOM05D000595 ORTHO05D004141 2.6e-65 252.7 202 62.4
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 4.4e-65 251.9 200 62.5
Cc00_g19580 Coffea canephora HOM05D000595 ORTHO05D004141 2.9e-64 249.2 197 62.4
CARHR099600 Cardamine hirsuta HOM05D000595 ORTHO05D004141 6.4e-64 248.1 197 61.9
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 1.2e-62 243.8 217 55.8
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.6e-62 243.4 200 60.0
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 2.7e-62 242.7 217 55.8
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 2.7e-62 242.7 217 55.8
BraA01t03265Z Brassica rapa HOM05D000595 ORTHO05D004141 4.6e-62 241.9 200 59.0
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 7.8e-62 241.1 202 59.9
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 7.8e-62 241.1 217 55.3
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 1.3e-61 240.4 200 59.0
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 2.5e-60 236.1 204 57.8
CSS0018432 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 9.5e-60 234.2 204 60.3
vmacro00079 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 3.6e-59 232.3 195 60.0
BcaB04g20431 Brassica carinata HOM05D000595 ORTHO05D004141 4.7e-59 231.9 200 57.0
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 3.1e-58 229.2 219 54.8
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.9e-56 222.6 183 62.3
Ciclev10002552m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.2e-55 219.2 172 64.5
SGA_v2.0_scaffold89G27418 Striga asiatica HOM05D000595 ORTHO05D004141 1.2e-54 217.2 205 54.6
Oeu042203.1 Olea europaea HOM05D000595 ORTHO05D004141 2.7e-54 216.1 174 63.2
Oeu042206.1 Olea europaea HOM05D000595 ORTHO05D004141 3.5e-54 215.7 199 58.3
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 6.0e-54 214.9 206 52.9
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 3.0e-53 212.6 208 51.4
FAN16G0455 Fragaria x ananassa HOM05D000595 ORTHO05D004141 1.5e-52 210.3 187 57.2
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 7.3e-52 208.0 206 49.5
SEGI_21462 Sequoiadendron giganteum HOM05D000595 ORTHO05D004141 7.3e-52 208.0 172 59.3
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 9.5e-52 207.6 198 53.0
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 2.1e-51 206.5 204 52.5
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.1e-51 206.5 199 50.8
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.1e-50 204.1 203 53.7
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 3.1e-50 202.6 205 49.3
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.2e-46 190.7 208 46.6
Oeu042194.1 Olea europaea HOM05D000595 ORTHO05D004141 1.6e-46 190.3 184 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 2.7e-46 189.5 213 46.0
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 1.9e-44 183.3 206 46.6
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 1.9e-44 183.3 169 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis HOM05D000595 ORTHO05D004141 1.4e-42 177.2 220 45.0
Ciclev10013908m.g Citrus clementina HOM05D000595 ORTHO05D004141 2.8e-35 152.9 88 78.4
Pp3c19_14150 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.0e-29 134.4 117 54.7
Lsat_1_v5_gn_6_67241 Lactuca sativa HOM05D000595 ORTHO05D004141 3.3e-28 129.4 133 54.9
COL.COLO4_06174 Corchorus olitorius HOM05D000595 ORTHO05D004141 7.4e-28 128.3 211 36.5
Cpa.g.c48289 Carica papaya HOM05D000595 ORTHO05D004141 1.3e-27 127.5 68 83.8
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 1.2e-22 110.9 82 63.4
RcHm_v2.0_Chr7g0213741 Rosa chinensis HOM05D000595 ORTHO05D004141 2.3e-21 106.7 87 62.1
FAN16G3365 Fragaria x ananassa HOM05D001806 ORTHO05D013993 2.0e-17 93.6 82 54.9
PGSC0003DMG400007975 Solanum tuberosum HOM05D000595 ORTHO05D004141 1.0e-16 91.3 60 71.7
FAN09G4858 Fragaria x ananassa HOM05D001806 ORTHO05D013993 9.6e-12 74.7 67 52.2


User provided reference genes

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