Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01335 Erythranthe guttata HOM05D041579 ORTHO05D025326 1.3e-111 406.4 203 100.0
SGA_v2.0_scaffold111G31375 Striga asiatica HOM05D041579 ORTHO05D025326 1.8e-23 113.6 210 38.1
Oeu038596.1 Olea europaea HOM05D001194 ORTHO05D025326 5.3e-20 102.1 184 39.7
SalBow8G4826 Salvia bowleyana HOM05D041579 ORTHO05D025326 1.1e-14 84.3 130 40.8
Solyc08g076020.4 Solanum lycopersicum HOM05D001577 ORTHO05D003311 2.2e-13 80.1 178 30.9
Sopen08g024670 Solanum pennellii HOM05D001194 ORTHO05D004506 3.7e-13 79.3 219 28.3
Nitab4.5_0008112g0010 Nicotiana tabacum HOM05D001194 ORTHO05D004506 1.8e-12 77.0 288 25.7
Lj8A324T106 Lonicera japonica HOM05D001194 ORTHO05D004506 9.1e-12 74.7 150 36.7
PGSC0003DMG400009302 Solanum tuberosum HOM05D001194 ORTHO05D004506 4.5e-11 72.4 164 30.5
Nitab4.5_0000543g0040 Nicotiana tabacum HOM05D001194 ORTHO05D025326 5.0e-10 68.9 165 31.5
Cc08_g04270 Coffea canephora HOM05D001194 ORTHO05D004506 1.1e-09 67.8 86 45.3
CAN.G773.7 Capsicum annuum HOM05D001194 ORTHO05D004506 1.9e-09 67.0 85 40.0
Dinv29043 Davidia involucrata HOM05D001194 ORTHO05D004506 4.2e-09 65.9 87 43.7
Hma1.2p1_0979F.1_g243540 Hydrangea macrophylla HOM05D001194 ORTHO05D004506 5.5e-09 65.5 173 28.3
Peaxi162Scf00408g00320 Petunia axillaris HOM05D001577 ORTHO05D003311 3.0e-07 59.7 81 42.0
CSS0050239 Camellia sinensis var. sinensis HOM05D001194 ORTHO05D004506 8.8e-07 58.2 121 33.9
Sopen03g027630 Solanum pennellii HOM05D001194 ORTHO05D004506 2.6e-06 56.6 102 34.3
SGA_v2.0_scaffold45G16989 Striga asiatica HOM05D001194 ORTHO05D002622 2.6e-06 56.6 127 30.7
Duzib106G2028 Durio zibethinus HOM05D001194 ORTHO05D004506 3.3e-06 56.2 115 38.3
Solyc03g096880.4 Solanum lycopersicum HOM05D001194 ORTHO05D004506 3.3e-06 56.2 102 34.3
Sopen06g029200 Solanum pennellii HOM05D001194 ORTHO05D004506 3.3e-06 56.2 89 33.7
Peaxi162Scf00815g00238 Petunia axillaris HOM05D001194 ORTHO05D004506 4.4e-06 55.8 83 36.1
SalBow4G0864 Salvia bowleyana HOM05D001194 ORTHO05D004506 4.4e-06 55.8 78 42.3
Solyc06g072820.3 Solanum lycopersicum HOM05D001194 ORTHO05D004506 4.4e-06 55.8 89 33.7
PGSC0003DMG400000539 Solanum tuberosum HOM05D001194 ORTHO05D004506 4.4e-06 55.8 102 34.3
MSTRG.26935 Avicennia marina HOM05D001194 ORTHO05D004506 5.7e-06 55.5 82 39.0
PGSC0003DMG402027032 Solanum tuberosum HOM05D001194 ORTHO05D004506 5.7e-06 55.5 91 33.0
Dinv17265 Davidia involucrata HOM05D001194 ORTHO05D004506 7.4e-06 55.1 82 37.8
SGA_v2.0_scaffold44G16882 Striga asiatica HOM05D001194 ORTHO05D004506 7.4e-06 55.1 154 29.2
MSTRG.8580 Avicennia marina HOM05D001194 ORTHO05D004506 9.7e-06 54.7 95 37.9
Thecc.05G208200 Theobroma cacao HOM05D001194 ORTHO05D004506 9.7e-06 54.7 122 36.9
unitig_92.g28231 Utricularia gibba HOM05D001194 ORTHO05D004506 9.7e-06 54.7 75 44.0


User provided reference genes

Program Settings