Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01280 Erythranthe guttata HOM05D002255 ORTHO05D002288 1.5e-61 239.2 112 100.0
SalBow8G1331 Salvia bowleyana HOM05D002255 ORTHO05D002288 5.0e-12 74.7 44 84.1
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 6.1e-10 67.8 59 59.3
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 8.0e-10 67.4 79 48.1
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 1.0e-09 67.0 55 60.0
Lj2P163T54 Lonicera japonica HOM05D002255 ORTHO05D002288 1.0e-09 67.0 69 55.1
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 1.8e-09 66.2 69 52.2
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 2.3e-09 65.9 66 56.1
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 2.3e-09 65.9 66 56.1
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 3.0e-09 65.5 80 52.5
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.0e-09 65.1 66 56.1
SGA_v2.0_scaffold111G31397 Striga asiatica HOM05D002255 ORTHO05D002288 4.0e-09 65.1 54 63.0
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 6.8e-09 64.3 49 67.3
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 1.2e-08 63.5 56 60.7
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 2.0e-08 62.8 70 51.4
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 3.4e-08 62.0 82 48.8
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 7.5e-08 60.8 73 46.6
Lsat_1_v5_gn_3_11301 Lactuca sativa HOM05D002255 ORTHO05D002288 7.5e-08 60.8 54 63.0
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 7.5e-08 60.8 60 58.3
Nn3g18976 Nelumbo nucifera HOM05D002255 ORTHO05D002288 9.8e-08 60.5 55 60.0
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 9.8e-08 60.5 55 56.4
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 1.3e-07 60.1 56 55.4
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 1.3e-07 60.1 73 46.6
DCAR_006522 Daucus carota HOM05D002255 ORTHO05D002288 1.3e-07 60.1 54 53.7
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 1.3e-07 60.1 70 48.6
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 1.3e-07 60.1 70 48.6
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 1.3e-07 60.1 70 48.6
Aqoxy7G00071 Aquilegia oxysepala HOM05D002255 ORTHO05D002288 1.7e-07 59.7 86 40.7
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 1.7e-07 59.7 55 58.2
Atru.chr9.1928 Acer truncatum HOM05D002255 ORTHO05D002288 2.2e-07 59.3 66 50.0
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 2.2e-07 59.3 69 52.2
CiPaw.12G081200 Carya illinoinensis HOM05D002255 ORTHO05D002288 2.8e-07 58.9 78 46.2
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 2.8e-07 58.9 77 42.9
QL02p029860 Quercus lobata HOM05D002255 ORTHO05D002288 2.8e-07 58.9 82 42.7
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 2.8e-07 58.9 53 62.3
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 3.7e-07 58.5 84 44.0
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 3.7e-07 58.5 88 40.9
Cfa011979 Carpinus fangiana HOM05D002255 ORTHO05D002288 6.3e-07 57.8 65 50.8
CiPaw.11G118700 Carya illinoinensis HOM05D002255 ORTHO05D002288 8.3e-07 57.4 61 52.5
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 8.3e-07 57.4 75 49.3
Glyma.08G024400 Glycine max HOM05D002255 ORTHO05D002288 1.1e-06 57.0 55 54.5
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 1.1e-06 57.0 67 52.2
PGR042G2287 Punica granatum HOM05D002255 ORTHO05D002288 1.1e-06 57.0 65 52.3
QL02p029876 Quercus lobata HOM05D002255 ORTHO05D002288 1.1e-06 57.0 79 43.0
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 1.8e-06 56.2 55 49.1
Sed0012868 Sechium edule HOM05D002255 ORTHO05D002288 1.8e-06 56.2 53 58.5
COL.COLO4_10731 Corchorus olitorius HOM05D002255 ORTHO05D002288 2.4e-06 55.8 69 47.8
Glyma.05G218300 Glycine max HOM05D002255 ORTHO05D002288 2.4e-06 55.8 55 52.7
Gohir.A09G189700 Gossypium hirsutum HOM05D002255 ORTHO05D002288 3.1e-06 55.5 60 51.7
Phvul.002G300100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 3.1e-06 55.5 92 41.3
THA.LOC104813045 Tarenaya hassleriana HOM05D012458 ORTHO05D014337 3.1e-06 55.5 48 58.3
Prupe.5G123000 Prunus persica HOM05D002255 ORTHO05D002288 4.1e-06 55.1 83 42.2
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 5.4e-06 54.7 46 63.0
Gohir.D09G184400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 5.4e-06 54.7 60 50.0
Gorai.006G206900 Gossypium raimondii HOM05D002255 ORTHO05D002288 5.4e-06 54.7 60 50.0
QL02p029867 Quercus lobata HOM05D002255 ORTHO05D002288 7.0e-06 54.3 53 56.6
TPR.G3449 Trifolium pratense HOM05D002255 ORTHO05D002288 7.0e-06 54.3 74 47.3
Duzib205G1099 Durio zibethinus HOM05D002255 ORTHO05D002288 9.1e-06 53.9 68 48.5
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 9.1e-06 53.9 74 47.3
Psat7g024880 Pisum sativum HOM05D002255 ORTHO05D002288 9.1e-06 53.9 74 41.9
VMungo0251G1524 Vigna mungo HOM05D002255 ORTHO05D002288 9.1e-06 53.9 98 39.8


User provided reference genes

Program Settings