Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01266 Erythranthe guttata HOM05D005346 ORTHO05D007051 2.7e-95 352.1 186 100.0
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 7.6e-74 280.8 139 99.3
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 6.3e-52 208.0 149 72.5
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 2.9e-49 199.1 138 71.0
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 5.2e-46 188.3 148 64.2
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 2.8e-44 182.6 140 70.7
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 1.1e-43 180.6 148 66.2
Migut.H01199 Erythranthe guttata HOM05D005346 ORTHO05D007051 4.5e-42 175.3 96 90.6
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 8.5e-41 171.0 132 67.4
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 4.2e-40 168.7 139 65.5
SalBow6G4970 Salvia bowleyana HOM05D005346 ORTHO05D007051 8.8e-38 161.0 218 46.3
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 3.1e-35 152.5 156 53.8
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 1.2e-34 150.6 145 57.9
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 2.0e-34 149.8 172 52.3
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 2.7e-34 149.4 155 56.8
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 3.5e-34 149.1 151 54.3
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 1.0e-33 147.5 151 53.6
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 1.3e-33 147.1 150 57.3
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 7.2e-32 141.4 98 67.3
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 7.2e-32 141.4 98 67.3
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 7.2e-32 141.4 98 67.3
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 7.2e-32 141.4 151 53.6
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 7.2e-32 141.4 151 53.6
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 9.4e-32 141.0 98 67.3
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 1.2e-31 140.6 98 67.3
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 1.2e-31 140.6 151 53.6
Cc08_g13250 Coffea canephora HOM05D005346 ORTHO05D007051 1.6e-31 140.2 151 55.0
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 2.1e-31 139.8 146 56.8
Hma1.2p1_0138F.1_g063170 Hydrangea macrophylla HOM05D005346 ORTHO05D007051 4.7e-31 138.7 99 68.7
THA.LOC104809446 Tarenaya hassleriana HOM05D005346 ORTHO05D007051 6.1e-31 138.3 120 58.3
Actinidia02088 Actinidia chinensis HOM05D005346 ORTHO05D007051 1.0e-30 137.5 155 52.9
Nn4g26377 Nelumbo nucifera HOM05D005346 ORTHO05D007051 1.4e-30 137.1 152 55.3
Cpa.g.sc29.89 Carica papaya HOM05D005346 ORTHO05D007051 1.8e-30 136.7 99 67.7
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 2.3e-30 136.3 153 52.3
EL10Ac5g12617 Beta vulgaris HOM05D005346 ORTHO05D007051 6.8e-30 134.8 147 51.7
BcaB07g31363 Brassica carinata HOM05D005346 ORTHO05D007051 6.8e-30 134.8 100 66.0
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 6.8e-30 134.8 135 50.4
Thhalv10023661m.g Eutrema salsugineum HOM05D005346 ORTHO05D007051 6.8e-30 134.8 152 53.3
GSVIVG01004909001 Vitis vinifera HOM05D005346 ORTHO05D007051 6.8e-30 134.8 149 53.0
Carub.0002s0213 Capsella rubella HOM05D005346 ORTHO05D007051 1.2e-29 134.0 152 49.3
AUR62010513 Chenopodium quinoa HOM05D005346 ORTHO05D007051 2.0e-29 133.3 147 51.7
AUR62017389 Chenopodium quinoa HOM05D005346 ORTHO05D007051 2.0e-29 133.3 148 53.4
MBI12_g34008_MAGBIO Magnolia biondii HOM05D005346 ORTHO05D007051 2.0e-29 133.3 122 59.8
Sc22g0000580 Simmondsia chinensis HOM05D005346 ORTHO05D007051 2.0e-29 133.3 146 51.4
Atru.chr9.1434 Acer truncatum HOM05D005346 ORTHO05D007051 2.6e-29 132.9 155 51.6
PGR042G0462 Punica granatum HOM05D005346 ORTHO05D007051 2.6e-29 132.9 144 52.8
SalBow1G0489 Salvia bowleyana HOM05D005346 ORTHO05D007051 2.6e-29 132.9 115 67.0
Aa31LG2G370 Aethionema arabicum HOM05D005346 ORTHO05D007051 3.4e-29 132.5 100 63.0
HanXRQChr17g0549091 Helianthus annuus HOM05D005346 ORTHO05D007051 7.5e-29 131.3 149 51.0
Potri.003G115300 Populus trichocarpa HOM05D005346 ORTHO05D007051 7.5e-29 131.3 99 67.7
Rhsim07G0101400 Rhododendron simsii HOM05D005346 ORTHO05D007051 7.5e-29 131.3 150 53.3
Nitab4.5_0012948g0030 Nicotiana tabacum HOM05D005346 ORTHO05D007051 9.8e-29 131.0 161 49.7
AL2G12910 Arabidopsis lyrata HOM05D005346 ORTHO05D007051 1.7e-28 130.2 100 62.0
Ciclev10021953m.g Citrus clementina HOM05D005346 ORTHO05D007051 1.7e-28 130.2 99 67.7
PSO478G1917 Papaver somniferum HOM05D005346 ORTHO05D007051 1.7e-28 130.2 142 50.7
Thecc.03G262000 Theobroma cacao HOM05D005346 ORTHO05D007051 1.7e-28 130.2 99 65.7
Sed0008355 Sechium edule HOM05D005346 ORTHO05D007051 2.2e-28 129.8 124 56.5
TWI60G0731 Tripterygium wilfordii HOM05D005346 ORTHO05D007051 2.2e-28 129.8 98 64.3
COL.COLO4_23877 Corchorus olitorius HOM05D005346 ORTHO05D007051 4.8e-28 128.6 99 64.6
Duzib084G0498 Durio zibethinus HOM05D005346 ORTHO05D007051 6.3e-28 128.3 99 64.6
RcHm_v2.0_Chr7g0201521 Rosa chinensis HOM05D005346 ORTHO05D007051 6.3e-28 128.3 141 52.5
Sp2g01760 Schrenkiella parvula HOM05D005346 ORTHO05D007051 6.3e-28 128.3 99 61.6
FAN04G2793 Fragaria x ananassa HOM05D000062 ORTHO05D007051 8.3e-28 127.9 139 51.8
CiPaw.12G104700 Carya illinoinensis HOM05D005346 ORTHO05D007051 1.1e-27 127.5 99 66.7
FvH4_5g00690 Fragaria vesca HOM05D005346 ORTHO05D007051 1.1e-27 127.5 139 51.1
CDE11G0613 Ceratophyllum demersum HOM05D005346 ORTHO05D007051 1.4e-27 127.1 100 63.0
Gohir.A03G011800 Gossypium hirsutum HOM05D005346 ORTHO05D007051 1.8e-27 126.7 99 64.6
QL05p030033 Quercus lobata HOM05D005346 ORTHO05D007051 1.8e-27 126.7 99 65.7
QL12p015018 Quercus lobata HOM05D005346 ORTHO05D007051 1.8e-27 126.7 99 65.7
Gorai.003G166600 Gossypium raimondii HOM05D005346 ORTHO05D007051 3.1e-27 125.9 99 64.6
Lsat_1_v5_gn_6_9800 Lactuca sativa HOM05D005346 ORTHO05D007051 3.1e-27 125.9 133 53.4
TAR629G0356 Trochodendron aralioides HOM05D005346 ORTHO05D007051 3.1e-27 125.9 95 68.4
HPP92_003521 Vanilla planifolia HOM05D005346 ORTHO05D007051 3.1e-27 125.9 128 50.8
Haze_09052 Corylus avellana HOM05D005346 ORTHO05D007051 4.1e-27 125.6 145 51.7
MD04G1079400 Malus domestica HOM05D005346 ORTHO05D007051 4.1e-27 125.6 146 53.4
arahy.Tifrunner.gnm1.ann1.FP1HKG Arachis hypogaea HOM05D005346 ORTHO05D007051 5.4e-27 125.2 104 62.5
Gorai.005G179200 Gossypium raimondii HOM05D005346 ORTHO05D007051 7.0e-27 124.8 140 51.4
Manes.01G073500 Manihot esculenta HOM05D005346 ORTHO05D007051 7.0e-27 124.8 99 64.6
Prupe.5G079700 Prunus persica HOM05D005346 ORTHO05D007051 7.0e-27 124.8 141 51.8
Lj4g0017997 Lotus japonicus HOM05D005346 ORTHO05D007051 9.1e-27 124.4 98 64.3
FAN13G0616 Fragaria x ananassa HOM05D005346 ORTHO05D007051 1.2e-26 124.0 139 49.6
Lalb_Chr05g0225391 Lupinus albus HOM05D005346 ORTHO05D007051 1.2e-26 124.0 136 50.7
CANSAT21G2498 Cannabis sativa HOM05D005346 ORTHO05D007051 1.6e-26 123.6 95 68.4
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 1.6e-26 123.6 97 64.9
PSO782G1275 Papaver somniferum HOM05D005346 ORTHO05D007051 2.0e-26 123.2 150 48.7
Cfa012017 Carpinus fangiana HOM05D005346 ORTHO05D007051 2.7e-26 122.9 98 64.3
Psat4g068640 Pisum sativum HOM05D005346 ORTHO05D007051 2.7e-26 122.9 131 55.0
Sabra03G0079900 Salix brachista HOM05D005346 ORTHO05D007051 2.7e-26 122.9 83 73.5
CsaV3_3G003190 Cucumis sativus L. HOM05D005346 ORTHO05D007051 3.5e-26 122.5 124 54.8
Glyma.17G135200 Glycine max HOM05D005346 ORTHO05D007051 3.5e-26 122.5 136 51.5
TAR629G0085 Trochodendron aralioides HOM05D005346 ORTHO05D007051 3.5e-26 122.5 95 66.3
AT1G62850 Arabidopsis thaliana HOM05D005346 ORTHO05D007051 4.5e-26 122.1 95 62.1
ATR0579G161 Amborella trichopoda HOM05D005346 ORTHO05D007051 5.9e-26 121.7 98 66.3
Glyma.05G052900 Glycine max HOM05D005346 ORTHO05D007051 5.9e-26 121.7 146 51.4
Gohir.D03G158100 Gossypium hirsutum HOM05D005346 ORTHO05D007051 5.9e-26 121.7 95 65.3
Zm00001eb010680 Zea mays HOM05D005346 ORTHO05D007051 5.9e-26 121.7 101 63.4
Gorai.011G192800 Gossypium raimondii HOM05D005346 ORTHO05D007051 7.7e-26 121.3 100 62.0
TPR.G37664 Trifolium pratense HOM05D005346 ORTHO05D007051 7.7e-26 121.3 98 64.3
MELO3C013984.2 Cucumis melo HOM05D005346 ORTHO05D007051 1.0e-25 120.9 126 53.2
Medtr4g102230 Medicago truncatula HOM05D005346 ORTHO05D007051 1.7e-25 120.2 131 51.9
Potri.001G117500 Populus trichocarpa HOM05D005346 ORTHO05D007051 1.7e-25 120.2 95 65.3
Aqoxy7G00648 Aquilegia oxysepala HOM05D005346 ORTHO05D007051 2.9e-25 119.4 109 56.0
Gohir.D06G129850 Gossypium hirsutum HOM05D005346 ORTHO05D007051 2.9e-25 119.4 100 61.0
Sabra01G0090200 Salix brachista HOM05D005346 ORTHO05D007051 2.9e-25 119.4 83 72.3
ECA233G1833 Erigeron canadensis HOM05D005346 ORTHO05D007051 3.8e-25 119.0 101 58.4
VMungo1215G1290 Vigna mungo HOM05D005346 ORTHO05D007051 3.8e-25 119.0 129 51.9
Hund28689 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.1e-24 117.5 96 62.5
Hund28691 Selenicereus undatus HOM05D005346 ORTHO05D007051 1.1e-24 117.5 96 62.5
Phvul.003G215000 Phaseolus vulgaris HOM05D005346 ORTHO05D007051 1.9e-24 116.7 96 61.5
Gorai.002G177500 Gossypium raimondii HOM05D005346 ORTHO05D007051 2.5e-24 116.3 96 61.5
Os03g0249200 Oryza sativa ssp. japonica HOM05D005346 ORTHO05D007051 2.5e-24 116.3 95 63.2
Lj8A255T54 Lonicera japonica HOM05D005346 ORTHO05D007051 5.5e-24 115.2 183 43.2
Gohir.D13G182400 Gossypium hirsutum HOM05D005346 ORTHO05D007051 9.8e-21 104.4 77 66.2
SEGI_23485 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 2.2e-20 103.2 83 62.7
Mapoly0185s0016 Marchantia polymorpha HOM05D005346 ORTHO05D007051 7.0e-19 98.2 92 53.3
Actinidia14465 Actinidia chinensis HOM05D005346 ORTHO05D007051 1.2e-18 97.4 152 42.1
Pp3c9_5680 Physcomitrium patens HOM05D005346 ORTHO05D007051 2.7e-18 96.3 94 51.1
CBR_g59652 Chara braunii HOM05D005346 ORTHO05D007051 1.0e-14 84.3 60 68.3
ClCG10G003160 Citrullus lanatus HOM05D005346 ORTHO05D007051 6.8e-14 81.6 139 42.4
Nitab4.5_0001816g0160 Nicotiana tabacum HOM05D005346 ORTHO05D020323 3.7e-12 75.9 114 43.0
SEGI_25852 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 8.3e-12 74.7 44 77.3
PGSC0003DMG400012509 Solanum tuberosum HOM05D005346 ORTHO05D020323 7.0e-11 71.6 173 32.9
arahy.Tifrunner.gnm1.ann1.IL3HUZ Arachis hypogaea HOM05D005346 ORTHO05D007051 3.5e-10 69.3 88 48.9
Cre02.g101800 Chlamydomonas reinhardtii HOM05D005346 ORTHO05D007051 4.6e-10 68.9 73 50.7
PRCOL_00004903 Prasinoderma coloniale HOM05D005346 ORTHO05D007051 4.6e-10 68.9 51 54.9
Peaxi162Scf00102g01240 Petunia axillaris HOM05D005346 ORTHO05D020323 7.8e-10 68.2 144 36.1
MCO12G072 Micromonas commoda HOM05D005346 ORTHO05D007051 1.3e-09 67.4 59 57.6
Sopen08g003450 Solanum pennellii HOM05D005346 ORTHO05D020323 1.3e-09 67.4 172 32.6
Solyc08g007490.3 Solanum lycopersicum HOM05D005346 ORTHO05D020323 2.3e-09 66.6 172 32.0
AagrBONN_evm.TU.Sc2ySwM_369.472 Anthoceros agrestis HOM05D005346 ORTHO05D007051 6.6e-09 65.1 39 76.9
Nitab4.5_0001265g0030 Nicotiana tabacum HOM05D005346 ORTHO05D020323 1.9e-08 63.5 139 33.1
SMO164G0226 Selaginella moellendorffii HOM05D005346 ORTHO05D007051 2.5e-08 63.2 65 50.8
Actinidia02087 Actinidia chinensis HOM05D005346 ORTHO05D007051 5.6e-08 62.0 95 40.0
Nitab4.5_0003534g0100 Nicotiana tabacum HOM05D005346 ORTHO05D007051 3.6e-07 59.3 111 39.6
Haze_26312 Corylus avellana HOM05D005346 ORTHO05D007051 5.2e-06 55.5 55 47.3


User provided reference genes

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