Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.9e-277 958.7 570 100.0
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 4.0e-57 226.9 727 33.7
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 3.0e-36 157.5 580 28.6
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 6.5e-23 113.2 113 50.4
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 3.2e-22 110.9 628 24.4
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.2e-22 110.9 112 50.0
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 3.2e-22 110.9 296 30.4
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 7.9e-21 106.3 583 24.5
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 5.7e-19 100.1 193 32.6
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.2e-18 98.2 113 46.0
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.2e-18 98.2 107 48.6
SGA_v2.0_scaffold111G31456 Striga asiatica HOM05D034841 ORTHO05D002736 1.1e-17 95.9 450 27.3
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.8e-17 95.1 107 46.7
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 2.4e-17 94.7 595 24.7
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 6.9e-17 93.2 575 24.5
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 9.0e-17 92.8 189 31.7
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 9.0e-17 92.8 165 35.8
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-16 92.0 165 36.4
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 2.0e-16 91.7 309 26.9
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 1.3e-15 89.0 561 22.6
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-15 88.2 159 33.3
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 5.0e-15 87.0 114 43.0
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 6.5e-15 86.7 114 43.9
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.4e-14 85.5 114 43.0
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 2.5e-14 84.7 233 30.9
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 4.2e-14 84.0 165 34.5
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 4.2e-14 84.0 164 35.4
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 5.5e-14 83.6 110 43.6
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 5.5e-14 83.6 114 40.4
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 5.5e-14 83.6 112 38.4
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 5.5e-14 83.6 599 24.2
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 7.2e-14 83.2 213 30.0
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.2e-13 82.4 166 35.5
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 1.2e-13 82.4 110 43.6
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 1.2e-13 82.4 112 39.3
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 2.1e-13 81.6 109 41.3
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 2.7e-13 81.3 110 42.7
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 3.6e-13 80.9 114 40.4
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 3.6e-13 80.9 114 39.5
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 3.6e-13 80.9 112 37.5
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 4.6e-13 80.5 319 28.2
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 4.6e-13 80.5 112 38.4
Hund11407 Selenicereus undatus HOM05D002584 ORTHO05D002736 4.6e-13 80.5 112 40.2
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 6.1e-13 80.1 110 43.6
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 6.1e-13 80.1 114 37.7
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 6.1e-13 80.1 112 39.3
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 7.9e-13 79.7 118 39.0
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 7.9e-13 79.7 110 42.7
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 1.0e-12 79.3 114 39.5
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.0e-12 79.3 563 23.1
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 1.0e-12 79.3 110 42.7
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 1.0e-12 79.3 331 26.3
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 1.4e-12 79.0 115 40.9
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 2.3e-12 78.2 120 38.3
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 2.3e-12 78.2 244 29.1
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 3.0e-12 77.8 114 40.4
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 3.0e-12 77.8 114 39.5
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 3.9e-12 77.4 115 39.1
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 5.1e-12 77.0 114 39.5
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 5.1e-12 77.0 131 35.1
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 5.1e-12 77.0 304 26.6
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 5.1e-12 77.0 109 41.3
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 5.1e-12 77.0 115 36.5
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 6.7e-12 76.6 165 32.7
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 6.7e-12 76.6 231 30.7
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 6.7e-12 76.6 266 28.9
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 8.8e-12 76.3 588 23.0
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 8.8e-12 76.3 172 32.0
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 8.8e-12 76.3 114 37.7
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 8.8e-12 76.3 158 32.3
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 8.8e-12 76.3 162 32.7
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 1.1e-11 75.9 113 39.8
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 75.9 112 34.8
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 75.9 109 40.4
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 1.1e-11 75.9 115 35.7
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 1.5e-11 75.5 114 39.5
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 1.5e-11 75.5 114 39.5
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 1.5e-11 75.5 115 36.5
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-11 75.5 112 35.7
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 1.5e-11 75.5 114 39.5
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 1.9e-11 75.1 165 32.7
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 1.9e-11 75.1 114 39.5
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 2.5e-11 74.7 114 37.7
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 3.3e-11 74.3 336 26.5
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 3.3e-11 74.3 228 29.4
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 4.3e-11 73.9 186 30.1
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 5.7e-11 73.6 159 30.2
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 5.7e-11 73.6 115 34.8
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 5.7e-11 73.6 169 32.0
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 5.7e-11 73.6 164 33.5
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 7.4e-11 73.2 112 35.7
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 7.4e-11 73.2 281 27.0
EL10Ac5g12881 Beta vulgaris HOM05D002584 ORTHO05D002736 9.7e-11 72.8 113 34.5
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 9.7e-11 72.8 114 38.6
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 9.7e-11 72.8 362 24.9
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 9.7e-11 72.8 113 36.3
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 9.7e-11 72.8 167 32.3
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 9.7e-11 72.8 160 31.2
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 1.3e-10 72.4 114 37.7
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.3e-10 72.4 256 34.0
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 1.3e-10 72.4 163 30.7
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 1.7e-10 72.0 110 40.9
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 1.7e-10 72.0 110 39.1
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 1.7e-10 72.0 169 31.4
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 2.2e-10 71.6 113 36.3
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-10 71.6 224 28.6
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 3.7e-10 70.9 393 24.4
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.7e-10 70.9 114 36.8
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 3.7e-10 70.9 114 36.8
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 4.8e-10 70.5 255 27.8
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 4.8e-10 70.5 108 37.0
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 6.3e-10 70.1 163 27.6
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 6.3e-10 70.1 114 37.7
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 8.2e-10 69.7 110 40.0
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 1.1e-09 69.3 115 34.8
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 1.1e-09 69.3 241 29.0
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 1.1e-09 69.3 110 38.2
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-09 68.9 118 32.2
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-09 68.9 118 32.2
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-09 68.9 181 33.1
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 1.4e-09 68.9 590 22.7
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 1.8e-09 68.6 174 30.5
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 1.8e-09 68.6 174 30.5
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 1.8e-09 68.6 174 30.5
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 1.8e-09 68.6 110 38.2
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 2.4e-09 68.2 163 30.1
Sed0024155 Sechium edule HOM05D002584 ORTHO05D002736 3.1e-09 67.8 112 33.9
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 3.1e-09 67.8 244 27.5
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 4.1e-09 67.4 181 32.6
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 5.3e-09 67.0 226 29.6
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 5.3e-09 67.0 222 28.8
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 5.3e-09 67.0 226 29.6
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 5.3e-09 67.0 226 29.6
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 6.9e-09 66.6 583 25.0
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 9.1e-09 66.2 117 34.2
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 1.2e-08 65.9 230 30.4
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 1.2e-08 65.9 115 33.9
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 2.0e-08 65.1 112 31.2
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 2.0e-08 65.1 111 32.4
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 3.4e-08 64.3 122 34.4
HanXRQChr17g0535091 Helianthus annuus HOM05D002584 ORTHO05D002736 3.4e-08 64.3 220 29.5
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 5.9e-08 63.5 216 28.2
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 5.9e-08 63.5 410 23.4
PSO732G0349 Papaver somniferum HOM05D002584 ORTHO05D002736 7.7e-08 63.2 124 31.5
Nitab4.5_0004161g0010 Nicotiana tabacum HOM05D002584 ORTHO05D002736 1.0e-07 62.8 581 24.8
CAN.G1505.1 Capsicum annuum HOM05D002584 ORTHO05D002736 1.3e-07 62.4 114 35.1
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 1.3e-07 62.4 115 34.8
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.7e-07 62.0 219 30.1
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.7e-07 62.0 648 23.1
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 2.2e-07 61.6 111 33.3
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 2.9e-07 61.2 157 31.2
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.9e-07 61.2 239 26.8
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.9e-07 61.2 239 26.8
PSO675G5053 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-07 61.2 169 25.4
Os01g0656900 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 5.0e-07 60.5 115 29.6
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 5.0e-07 60.5 112 32.1
CAN.G792.54 Capsicum annuum HOM05D002584 ORTHO05D002736 6.5e-07 60.1 115 34.8
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 8.5e-07 59.7 314 25.8
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 1.1e-06 59.3 175 29.1
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 5.5e-06 57.0 321 24.9
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 7.2e-06 56.6 113 31.0
Hma1.2p1_0952F.1_g240875 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 9.4e-06 56.2 54 46.3
Hma1.2p1_0952F.1_g240890 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 9.4e-06 56.2 54 46.3


User provided reference genes

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