Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 6.5e-210 733.8 366 100.0
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.5e-155 552.0 360 74.7
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.2e-149 532.7 357 74.5
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.8e-143 513.1 360 70.0
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 4.4e-142 508.4 362 70.2
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 7.6e-142 507.7 362 69.9
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 7.6e-142 507.7 360 71.9
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 9.9e-142 507.3 354 71.5
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 2.2e-141 506.1 362 69.6
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 8.4e-141 504.2 359 69.9
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 4.1e-140 501.9 355 71.8
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 5.4e-140 501.5 352 71.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.7e-139 499.2 357 70.0
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.6e-139 498.4 358 69.3
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 7.8e-139 497.7 357 70.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.0e-138 497.3 395 65.1
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.3e-138 496.9 360 69.7
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.3e-138 496.1 357 70.0
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.0e-138 495.7 353 70.3
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 3.9e-138 495.4 351 70.9
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 3.9e-138 495.4 361 68.4
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.5e-137 493.4 357 68.1
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.9e-137 493.0 357 70.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 4.3e-137 491.9 357 69.5
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 5.6e-137 491.5 352 70.2
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 7.3e-137 491.1 359 67.4
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 4.7e-136 488.4 357 67.8
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.0e-135 485.3 360 68.1
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.2e-135 485.0 357 69.2
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 6.8e-135 484.6 352 69.0
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 8.9e-135 484.2 357 68.1
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 8.9e-135 484.2 357 68.3
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 3.4e-134 482.3 354 68.6
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 4.4e-134 481.9 362 67.4
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 5.8e-134 481.5 354 69.8
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 5.8e-134 481.5 354 69.8
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 5.8e-134 481.5 354 69.8
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 9.9e-134 480.7 356 66.9
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.3e-133 480.3 357 67.8
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.3e-133 480.3 356 68.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.7e-133 479.9 357 68.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 2.2e-133 479.6 357 66.9
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 6.4e-133 478.0 359 67.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 2.4e-132 476.1 354 67.8
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 4.2e-132 475.3 354 66.7
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.6e-131 473.4 354 67.2
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.5e-131 472.2 354 67.5
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.3e-130 470.3 355 67.3
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 1.7e-130 469.9 353 67.4
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 2.3e-130 469.5 353 66.9
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.0e-130 469.2 357 65.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 5.1e-130 468.4 352 67.9
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 8.7e-130 467.6 358 64.0
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 5.6e-129 464.9 352 68.2
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.6e-129 464.9 356 67.7
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 5.6e-129 464.9 352 67.0
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 9.6e-129 464.2 355 66.2
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.8e-127 459.9 352 66.8
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.8e-127 459.9 360 64.4
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 5.3e-127 458.4 357 64.1
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 6.9e-127 458.0 354 67.5
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.2e-125 453.0 357 64.4
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.9e-125 452.6 395 60.5
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.9e-125 452.6 354 64.4
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.4e-124 449.5 413 57.6
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 2.7e-123 446.0 355 65.6
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 6.6e-122 441.4 324 68.5
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 8.7e-122 441.0 356 64.3
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.1e-121 440.7 321 69.8
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.5e-121 440.3 321 68.8
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.6e-120 436.8 355 63.7
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 4.8e-120 435.3 321 68.8
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 8.4e-117 424.5 352 60.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 5.5e-116 421.8 353 61.8
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.1e-115 419.9 348 58.6
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.5e-113 413.7 326 64.1
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 2.5e-113 412.9 318 67.9
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 4.8e-112 408.7 353 57.5
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.1e-108 397.5 287 70.0
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 3.2e-108 396.0 356 61.0
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.1e-107 393.3 357 57.7
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.4e-90 337.4 227 74.4
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.1e-89 334.3 345 50.1
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.6e-89 333.2 345 49.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 8.2e-88 328.2 240 67.1
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.1e-87 327.8 333 50.5
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.3e-82 310.1 332 48.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.7e-82 308.5 345 52.2
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 2.2e-64 250.4 208 63.9
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 2.4e-63 246.9 302 48.3
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 8.5e-61 238.4 192 59.9
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.8e-59 233.4 484 32.2
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 3.7e-56 223.0 175 62.3
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.9e-40 169.5 132 61.4
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.9e-40 169.5 132 61.4
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.4e-39 167.2 168 54.2
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.0e-30 136.0 259 35.5
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.0e-29 133.7 163 46.0
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 8.9e-18 95.5 90 48.9
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-17 95.1 76 65.8
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.5e-17 94.7 88 50.0
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 2.1e-14 84.3 54 79.6
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 6.0e-14 82.8 87 41.4
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 1.6e-06 58.2 63 47.6


User provided reference genes

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