Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01124 Erythranthe guttata HOM05D000355 ORTHO05D000227 3.3e-37 157.9 82 100.0
Migut.D02224 Erythranthe guttata HOM05D000355 ORTHO05D000227 6.2e-28 127.1 75 86.7
MSTRG.21122 Avicennia marina HOM05D000355 ORTHO05D000227 2.9e-17 91.7 64 65.6
SalBow3G0577 Salvia bowleyana HOM05D000355 ORTHO05D000227 2.5e-16 88.6 74 63.5
MSTRG.18660 Avicennia marina HOM05D000355 ORTHO05D000227 7.1e-16 87.0 69 63.8
SalBow3G4139 Salvia bowleyana HOM05D000355 ORTHO05D000227 1.3e-14 82.8 64 62.5
Oeu030187.1 Olea europaea HOM05D000355 ORTHO05D000227 2.3e-14 82.0 69 58.0
Oeu001276.1 Olea europaea HOM05D000355 ORTHO05D000227 3.0e-14 81.6 81 54.3
Nitab4.5_0004624g0030 Nicotiana tabacum HOM05D000355 ORTHO05D000227 5.7e-13 77.4 59 66.1
Migut.N02599 Erythranthe guttata HOM05D000355 ORTHO05D000227 2.1e-12 75.5 58 65.5
PGSC0003DMG400008052 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.8e-12 75.1 61 67.2
SGA_v2.0_scaffold97G29237 Striga asiatica HOM05D000355 ORTHO05D000227 2.8e-12 75.1 71 57.7
Solyc11g069450.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 6.2e-12 73.9 61 65.6
Nitab4.5_0003214g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 4.0e-11 71.2 58 63.8
Sopen11g028170 Solanum pennellii HOM05D000355 ORTHO05D000227 4.0e-11 71.2 86 52.3
MSTRG.17799 Avicennia marina HOM05D000355 ORTHO05D000227 1.2e-10 69.7 71 50.7
Dinv32741 Davidia involucrata HOM05D000355 ORTHO05D000227 2.0e-10 68.9 69 56.5
Actinidia13996 Actinidia chinensis HOM05D000355 ORTHO05D000227 5.8e-10 67.4 78 53.8
Rhsim13G0094500 Rhododendron simsii HOM05D000355 ORTHO05D000227 1.7e-09 65.9 85 49.4
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.2e-09 65.5 78 52.6
QL01p022150 Quercus lobata HOM05D000355 ORTHO05D000227 2.9e-09 65.1 80 53.8
Solyc06g075170.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 3.8e-09 64.7 66 59.1
Cfa011313 Carpinus fangiana HOM05D000355 ORTHO05D000227 5.0e-09 64.3 87 52.9
Haze_23821 Corylus avellana HOM05D000355 ORTHO05D000227 5.0e-09 64.3 87 51.7
PGSC0003DMG400024323 Solanum tuberosum HOM05D000355 ORTHO05D000227 5.0e-09 64.3 66 59.1
CSS0020982 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 6.5e-09 63.9 77 54.5
Lj2P1027T37 Lonicera japonica HOM05D000355 ORTHO05D000227 1.1e-08 63.2 83 45.8
Sopen06g031580 Solanum pennellii HOM05D000355 ORTHO05D000227 2.5e-08 62.0 66 57.6
CSS0000055 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 5.5e-08 60.8 74 50.0
FAN25G1122 Fragaria x ananassa HOM05D000355 ORTHO05D000227 9.3e-08 60.1 80 50.0
COL.COLO4_18331 Corchorus olitorius HOM05D000355 ORTHO05D000227 1.2e-07 59.7 75 46.7
Nitab4.5_0000106g0180 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.6e-07 59.3 75 52.0
FvH4_3g32220 Fragaria vesca HOM05D000355 ORTHO05D000227 2.1e-07 58.9 80 48.8
FAN11G2838 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.1e-07 58.9 80 48.8
CAN.G1001.45 Capsicum annuum HOM05D000355 ORTHO05D000227 2.7e-07 58.5 63 52.4
Hma1.2p1_0055F.1_g031520 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 2.7e-07 58.5 72 55.6
Manes.11G145500 Manihot esculenta HOM05D000355 ORTHO05D000227 2.7e-07 58.5 79 46.8
Peaxi162Scf00270g00064 Petunia axillaris HOM05D000355 ORTHO05D000227 4.6e-07 57.8 61 54.1
CANSAT54G1097 Cannabis sativa HOM05D000355 ORTHO05D000227 6.1e-07 57.4 84 45.2
AL8G37270 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 7.9e-07 57.0 77 48.1
Cpa.g.sc216.3 Carica papaya HOM05D000355 ORTHO05D000227 1.3e-06 56.2 66 53.0
FAN21G3873 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.3e-06 56.2 80 47.5
Sabra09G0007700 Salix brachista HOM05D000355 ORTHO05D000227 1.3e-06 56.2 78 50.0
FAN16G1370 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.8e-06 55.8 80 48.8
Nitab4.5_0001075g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.8e-06 55.8 76 50.0
Oeu002873.1 Olea europaea HOM05D000355 ORTHO05D000227 1.8e-06 55.8 41 65.9
Oeu002874.1 Olea europaea HOM05D000355 ORTHO05D000227 1.8e-06 55.8 41 65.9
RcHm_v2.0_Chr5g0058841 Rosa chinensis HOM05D000355 ORTHO05D000227 3.0e-06 55.1 82 42.7
CiPaw.13G113500 Carya illinoinensis HOM05D000355 ORTHO05D000227 3.9e-06 54.7 79 46.8
DCAR_018807 Daucus carota HOM05D000001 ORTHO05D000003 3.9e-06 54.7 78 46.2
Duzib150G0251 Durio zibethinus HOM05D000355 ORTHO05D000227 3.9e-06 54.7 80 41.2
Duzib170G0021 Durio zibethinus HOM05D000355 ORTHO05D000227 6.7e-06 53.9 80 40.0
Lsat_1_v5_gn_6_45881 Lactuca sativa HOM05D000355 ORTHO05D000227 8.7e-06 53.5 77 44.2


User provided reference genes

Program Settings