Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.6e-79 299.3 143 100.0
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.6e-79 297.7 143 99.3
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.1e-64 250.0 139 79.9
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.1e-64 250.0 139 79.9
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 3.6e-63 245.0 140 77.1
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 3.9e-62 241.5 139 77.0
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 6.7e-62 240.7 139 77.7
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 6.7e-62 240.7 139 77.0
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 8.8e-62 240.4 140 78.6
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 2.8e-60 235.3 140 77.1
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.8e-60 234.6 141 75.2
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.1e-59 233.4 136 75.7
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 7.0e-59 230.7 143 75.5
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 7.0e-59 230.7 139 72.7
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.6e-58 229.6 139 74.8
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.6e-58 229.6 139 74.8
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 2.0e-58 229.2 140 73.6
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 2.6e-58 228.8 138 74.6
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.6e-58 228.8 135 74.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 5.9e-58 227.6 137 75.9
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.9e-58 227.6 138 71.7
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.7e-57 226.1 136 75.7
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 5.0e-57 224.6 137 72.3
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 8.5e-57 223.8 139 72.7
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.1e-56 223.4 139 74.1
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 3.2e-56 221.9 140 71.4
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 9.4e-56 220.3 137 73.0
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.4e-56 220.3 139 71.2
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 9.4e-56 220.3 140 70.0
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.1e-55 219.2 140 69.3
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.6e-55 218.4 139 71.9
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 4.7e-55 218.0 139 71.9
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 4.7e-55 218.0 136 72.1
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 6.1e-55 217.6 138 68.1
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 6.1e-55 217.6 139 70.5
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.1e-55 217.6 139 70.5
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 8.0e-55 217.2 139 70.5
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.4e-54 216.5 139 71.9
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.0e-54 215.3 139 69.8
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 4.0e-54 214.9 139 69.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.0e-54 214.9 139 69.8
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 5.2e-54 214.5 138 69.6
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 6.7e-54 214.2 139 68.3
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 8.8e-54 213.8 140 69.3
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.2e-53 213.4 118 78.0
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.0e-53 212.6 139 68.3
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 2.0e-53 212.6 140 69.3
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 2.6e-53 212.2 140 69.3
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.3e-53 211.8 181 58.0
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 3.3e-53 211.8 140 67.1
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.7e-53 211.1 139 67.6
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 7.5e-53 210.7 139 69.1
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 7.5e-53 210.7 140 68.6
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.3e-52 209.9 135 70.4
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 2.8e-52 208.8 140 70.0
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 3.7e-52 208.4 116 77.6
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.8e-52 208.0 139 66.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.1e-51 206.8 137 67.9
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 4.1e-51 204.9 140 68.6
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 5.3e-51 204.5 141 69.5
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 2.7e-50 202.2 120 73.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 5.9e-50 201.1 141 68.8
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 6.5e-49 197.6 138 68.1
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 6.5e-49 197.6 118 72.9
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 3.2e-48 195.3 175 54.3
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 5.5e-48 194.5 140 67.1
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 7.2e-48 194.1 119 72.3
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.0e-46 190.3 142 64.8
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 5.2e-46 188.0 112 75.0
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.2e-45 186.8 111 77.5
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.5e-45 186.4 135 62.2
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.6e-45 185.7 112 75.9
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 2.2e-44 182.6 146 62.3
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.1e-43 180.3 165 55.2
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 7.0e-43 177.6 157 58.6
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.7e-42 175.6 119 66.4
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.9e-41 172.2 102 78.4
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 2.5e-40 169.1 101 72.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 4.2e-40 168.3 250 39.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 4.2e-40 168.3 101 72.3
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.6e-39 166.4 123 66.7
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 4.7e-39 164.9 118 68.6
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.3e-38 162.5 140 54.3
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.9e-38 160.6 90 78.9
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 7.5e-37 157.5 136 61.0
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 9.8e-37 157.1 141 56.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 5.9e-34 147.9 141 48.9
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 1.0e-33 147.1 102 67.6
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.3e-33 146.0 166 47.0
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.9e-33 145.6 101 66.3
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 3.8e-33 145.2 143 46.2
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 5.0e-33 144.8 139 53.2
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.1e-32 143.7 88 75.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.9e-32 142.9 141 51.1
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 1.9e-32 142.9 99 66.7
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 4.3e-32 141.7 86 77.9
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-31 138.7 102 65.7
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 4.7e-31 138.3 119 49.6
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.3e-30 136.0 139 54.0
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.5e-29 133.3 111 59.5
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 5.8e-29 131.3 92 67.4
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.7e-28 128.6 105 58.1
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 4.9e-28 128.3 73 75.3
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.4e-27 126.7 79 68.4
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-25 119.8 113 56.6
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 8.6e-25 117.5 127 48.0
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 2.3e-22 109.4 73 64.4
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 8.9e-22 107.5 140 41.4
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 1.5e-21 106.7 122 43.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.0e-21 106.3 114 43.9
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 2.0e-21 106.3 71 69.0
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 4.9e-20 101.7 85 57.6
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 5.4e-19 98.2 137 43.8
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.1e-14 82.4 59 66.1
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 8.6e-09 64.3 38 76.3
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.9e-08 63.2 36 80.6
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.6e-07 60.1 43 65.1
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 3.1e-06 55.8 36 69.4


User provided reference genes

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