Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 4.0e-96 354.8 181 100.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 4.5e-47 191.8 177 62.1
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 4.7e-36 155.2 169 55.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.4e-19 100.5 169 39.6
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.4e-19 100.5 169 39.6
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 5.2e-19 98.6 178 38.8
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.4e-18 95.9 175 38.9
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.4e-16 90.5 174 40.2
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.9e-16 90.1 173 37.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 2.4e-16 89.7 163 43.6
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 4.1e-16 89.0 179 38.0
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 7.1e-16 88.2 186 38.2
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 9.2e-16 87.8 169 39.6
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.6e-15 87.0 171 33.9
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.6e-15 87.0 174 35.6
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.5e-15 85.9 164 36.0
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 3.5e-15 85.9 178 38.2
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 7.8e-15 84.7 178 37.6
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 1.3e-14 84.0 155 41.3
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 3.0e-14 82.8 170 40.6
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 3.9e-14 82.4 154 42.2
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.9e-14 82.4 171 36.3
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 5.1e-14 82.0 154 41.6
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 6.6e-14 81.6 174 35.1
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 1.1e-13 80.9 174 36.8
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.5e-13 80.5 176 35.8
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 1.5e-13 80.5 135 42.2
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.9e-13 80.1 151 39.7
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.9e-13 80.1 158 39.9
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 1.9e-13 80.1 170 36.5
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 3.3e-13 79.3 172 36.0
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 3.3e-13 79.3 158 39.9
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.3e-13 79.3 157 38.2
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 4.3e-13 79.0 153 39.2
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 5.6e-13 78.6 171 33.9
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 7.3e-13 78.2 175 32.6
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.6e-12 77.0 174 35.6
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 2.8e-12 76.3 180 33.9
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.4e-11 73.9 176 33.0
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.4e-11 73.2 173 33.5
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 5.2e-11 72.0 120 38.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 6.8e-11 71.6 169 34.3
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.8e-11 71.6 172 33.7
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 8.9e-11 71.2 165 33.3
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 8.9e-11 71.2 173 35.3
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 2.0e-10 70.1 172 33.7
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 2.0e-10 70.1 160 36.9
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 2.6e-10 69.7 156 34.0
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 3.4e-10 69.3 155 32.3
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 5.8e-10 68.6 159 30.2
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 9.9e-10 67.8 178 32.6
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 2.2e-09 66.6 156 36.5
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 2.2e-09 66.6 167 33.5
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 2.9e-09 66.2 160 32.5
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 2.9e-09 66.2 168 33.9
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 4.9e-09 65.5 110 39.1
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.9e-08 63.5 88 46.6
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.9e-08 63.5 170 34.7
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.4e-08 63.2 113 40.7
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 3.2e-08 62.8 135 36.3
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 3.2e-08 62.8 166 34.3
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 2.7e-07 59.7 94 41.5
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 2.7e-07 59.7 178 36.5
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 3.5e-07 59.3 174 27.6
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 3.5e-07 59.3 167 32.3
SGA_v2.0_scaffold139G35371 Striga asiatica HOM05D005250 ORTHO05D006342 4.6e-07 58.9 44 70.5
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 6.0e-07 58.5 169 32.0
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 1.0e-06 57.8 166 33.1
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.0e-06 57.8 187 29.4
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 1.0e-06 57.8 162 32.1
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 1.7e-06 57.0 166 29.5
SGA_v2.0_scaffold89G27590 Striga asiatica HOM05D000681 ORTHO05D009793 1.7e-06 57.0 94 40.4
unitig_8.g3919 Utricularia gibba HOM05D008113 ORTHO05D009793 3.9e-06 55.8 58 55.2


User provided reference genes

Program Settings