Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00880 Erythranthe guttata HOM05D017739 ORTHO05D001647 4.3e-71 271.2 132 100.0
Migut.E01748 Erythranthe guttata HOM05D017739 ORTHO05D001647 8.1e-70 266.9 132 97.7
Migut.E00881 Erythranthe guttata HOM05D017739 ORTHO05D001647 1.8e-29 132.9 118 54.2
Migut.E01694 Erythranthe guttata HOM05D017739 ORTHO05D001647 6.1e-25 117.9 104 50.0
Migut.E01813 Erythranthe guttata HOM05D017739 ORTHO05D001647 2.1e-17 92.8 126 40.5
Migut.F01515 Erythranthe guttata HOM05D017739 ORTHO05D001647 2.3e-16 89.4 124 41.9
Thhalv10001075m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 4.1e-13 78.6 130 34.6
QL02p021022 Quercus lobata HOM05D001817 ORTHO05D001647 2.2e-11 72.8 107 36.4
SGA_v2.0_scaffold116G32303 Striga asiatica HOM05D001817 ORTHO05D001647 2.2e-11 72.8 126 33.3
FvH4_2g28690 Fragaria vesca HOM05D001817 ORTHO05D001647 2.9e-11 72.4 126 36.5
Lalb_Chr12g0205721 Lupinus albus HOM05D001817 ORTHO05D001647 2.9e-11 72.4 122 36.1
THA.LOC104818605 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 2.9e-11 72.4 102 36.3
THA.LOC104818607 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 2.9e-11 72.4 102 36.3
THA.LOC104818611 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 2.9e-11 72.4 102 36.3
Thecc.02G154500 Theobroma cacao HOM05D001817 ORTHO05D001647 5.0e-11 71.6 110 38.2
Glyma.10G113700 Glycine max HOM05D001817 ORTHO05D001647 1.1e-10 70.5 121 34.7
Lalb_Chr03g0036441 Lupinus albus HOM05D001817 ORTHO05D001647 1.9e-10 69.7 129 33.3
Gohir.D13G060100 Gossypium hirsutum HOM05D001817 ORTHO05D001647 3.2e-10 68.9 105 37.1
Duzib052G0237 Durio zibethinus HOM05D001817 ORTHO05D001647 4.2e-10 68.6 106 35.8
Thhalv10001150m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 4.2e-10 68.6 81 38.3
Atru.chr6.250 Acer truncatum HOM05D001817 ORTHO05D001647 5.5e-10 68.2 125 32.8
AT4G32110 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 5.5e-10 68.2 115 33.9
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 5.5e-10 68.2 110 35.5
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea HOM05D001817 ORTHO05D001647 7.2e-10 67.8 123 35.8
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea HOM05D001817 ORTHO05D001647 7.2e-10 67.8 123 35.8
CARHR240020 Cardamine hirsuta HOM05D001817 ORTHO05D001647 7.2e-10 67.8 115 32.2
Eucgr.C01626 Eucalyptus grandis HOM05D001817 ORTHO05D001647 7.2e-10 67.8 109 35.8
Gohir.A13G061900 Gossypium hirsutum HOM05D001817 ORTHO05D001647 7.2e-10 67.8 105 37.1
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 7.2e-10 67.8 102 36.3
FAN15G2483 Fragaria x ananassa HOM05D000140 ORTHO05D000087 9.4e-10 67.4 111 30.6
FAN24G1722 Fragaria x ananassa HOM05D000140 ORTHO05D000087 9.4e-10 67.4 111 30.6
Glyma.10G271300 Glycine max HOM05D001817 ORTHO05D001647 9.4e-10 67.4 114 39.5
RcHm_v2.0_Chr6g0297461 Rosa chinensis HOM05D001817 ORTHO05D001647 2.1e-09 66.2 126 34.9
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.7e-09 65.9 86 34.9
Gorai.013G068000 Gossypium raimondii HOM05D001817 ORTHO05D001647 2.7e-09 65.9 105 36.2
Psat6g048880 Pisum sativum HOM05D001817 ORTHO05D001647 2.7e-09 65.9 103 34.0
Sp2g10630 Schrenkiella parvula HOM05D001817 ORTHO05D001647 2.7e-09 65.9 125 28.0
AL7G19750 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 4.7e-09 65.1 114 31.6
AT4G32105 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 4.7e-09 65.1 115 34.8
FvH4_2g27480 Fragaria vesca HOM05D001817 ORTHO05D001647 4.7e-09 65.1 106 31.1
VMungo0720G0118 Vigna mungo HOM05D001817 ORTHO05D001647 4.7e-09 65.1 109 33.0
BolC1t00680H Brassica oleracea HOM05D001817 ORTHO05D001647 6.1e-09 64.7 120 30.8
CiPaw.08G009300 Carya illinoinensis HOM05D001817 ORTHO05D001647 6.1e-09 64.7 110 35.5
FAN20G0384 Fragaria x ananassa HOM05D000140 ORTHO05D000087 6.1e-09 64.7 107 30.8
Medtr1g048300 Medicago truncatula HOM05D001817 ORTHO05D001647 6.1e-09 64.7 120 35.0
CARHR239990 Cardamine hirsuta HOM05D001817 ORTHO05D001647 1.0e-08 63.9 118 33.1
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 1.0e-08 63.9 110 35.5
TPR.G19813 Trifolium pratense HOM05D001817 ORTHO05D001647 1.0e-08 63.9 106 34.0
FAN27G0609 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.4e-08 63.5 87 35.6
FAN27G3307 Fragaria x ananassa HOM05D000140 ORTHO05D000087 1.4e-08 63.5 107 30.8
Sc03g0006280 Simmondsia chinensis HOM05D001817 ORTHO05D001647 1.4e-08 63.5 93 33.3
Migut.B00621 Erythranthe guttata HOM05D017739 ORTHO05D001647 1.8e-08 63.2 106 34.9
FAN24G1684 Fragaria x ananassa HOM05D001817 ORTHO05D001647 1.8e-08 63.2 86 34.9
Sabra09G0098900 Salix brachista HOM05D001817 ORTHO05D001647 2.3e-08 62.8 103 30.1
SalBow6G4108 Salvia bowleyana HOM05D001817 ORTHO05D001647 2.3e-08 62.8 89 37.1
Atru.chr12.564 Acer truncatum HOM05D001817 ORTHO05D001647 3.0e-08 62.4 123 31.7
AL7G19780 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 3.0e-08 62.4 86 34.9
FvH4_2g28701 Fragaria vesca HOM05D001817 ORTHO05D001647 3.0e-08 62.4 87 34.5
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 3.0e-08 62.4 109 33.9
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 3.0e-08 62.4 109 33.9
FvH4_5g25410 Fragaria vesca HOM05D001817 ORTHO05D001647 4.0e-08 62.0 98 33.7
FAN18G2855 Fragaria x ananassa HOM05D001817 ORTHO05D001647 4.0e-08 62.0 98 33.7
FAN24G3294 Fragaria x ananassa HOM05D001817 ORTHO05D001647 4.0e-08 62.0 87 34.5
Sed0003642 Sechium edule HOM05D001817 ORTHO05D001647 4.0e-08 62.0 86 38.4
Solyc10g054673.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 5.2e-08 61.6 105 30.5
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 5.2e-08 61.6 111 35.1
FvH4_2g28680 Fragaria vesca HOM05D001817 ORTHO05D001647 6.7e-08 61.2 125 31.2
Phvul.007G239600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 6.7e-08 61.2 120 31.7
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 6.7e-08 61.2 113 33.6
AT4G32100 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 8.8e-08 60.8 92 37.0
Psat0s3990g0120 Pisum sativum HOM05D001817 ORTHO05D001647 8.8e-08 60.8 124 31.5
Glyma.07G189600 Glycine max HOM05D001817 ORTHO05D001647 1.2e-07 60.5 102 40.2
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 1.2e-07 60.5 103 32.0
Carub.0007s0847 Capsella rubella HOM05D001817 ORTHO05D001647 1.5e-07 60.1 119 31.9
PGR044G0606 Punica granatum HOM05D001817 ORTHO05D001647 1.5e-07 60.1 103 31.1
Sp2g10660 Schrenkiella parvula HOM05D001817 ORTHO05D001647 1.5e-07 60.1 107 34.6
Phvul.004G057100 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 2.0e-07 59.7 118 32.2
VMungo0331G0739 Vigna mungo HOM05D001817 ORTHO05D001647 2.0e-07 59.7 110 33.6
AT4G32090 Arabidopsis thaliana HOM05D001817 ORTHO05D001647 2.6e-07 59.3 124 33.1
ClCG05G016680 Citrullus lanatus HOM05D001817 ORTHO05D001647 2.6e-07 59.3 86 36.0
Sp7g29890 Schrenkiella parvula HOM05D001817 ORTHO05D001647 3.3e-07 58.9 121 32.2
Solyc10g054677.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 3.3e-07 58.9 105 29.5
SGA_v2.0_scaffold71G23793 Striga asiatica HOM05D001817 ORTHO05D001647 3.3e-07 58.9 82 34.1
C07p59090 Brassica napus HOM05D001817 ORTHO05D001647 4.4e-07 58.5 113 31.9
BolC7t46357H Brassica oleracea HOM05D001817 ORTHO05D001647 4.4e-07 58.5 113 31.9
BraA03t15168Z Brassica rapa HOM05D001817 ORTHO05D001647 4.4e-07 58.5 113 31.9
ClCG05G016690 Citrullus lanatus HOM05D001817 ORTHO05D001647 4.4e-07 58.5 109 31.2
MD15G1128800 Malus domestica HOM05D001817 ORTHO05D001647 4.4e-07 58.5 102 34.3
Manes.02G218600 Manihot esculenta HOM05D001817 ORTHO05D001647 4.4e-07 58.5 113 36.3
Ciclev10009917m.g Citrus clementina HOM05D001817 ORTHO05D001647 5.7e-07 58.2 78 37.2
Haze_21486 Corylus avellana HOM05D001817 ORTHO05D001647 5.7e-07 58.2 117 31.6
Thhalv10026845m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 5.7e-07 58.2 123 32.5
Glyma.08G316300 Glycine max HOM05D001817 ORTHO05D001647 7.5e-07 57.8 118 32.2
Lalb_Chr13g0294691 Lupinus albus HOM05D001817 ORTHO05D001647 7.5e-07 57.8 86 37.2
Actinidia22324 Actinidia chinensis HOM05D001817 ORTHO05D001647 9.7e-07 57.4 64 37.5
Glyma.13G199700 Glycine max HOM05D001817 ORTHO05D001647 9.7e-07 57.4 111 29.7
A01p06210 Brassica napus HOM05D001817 ORTHO05D001647 1.3e-06 57.0 123 29.3
A03p61240 Brassica napus HOM05D001817 ORTHO05D001647 1.3e-06 57.0 113 31.0
DCAR_015990 Daucus carota HOM05D001817 ORTHO05D001647 1.3e-06 57.0 120 26.7
Duzib150G1023 Durio zibethinus HOM05D001817 ORTHO05D001647 1.3e-06 57.0 117 30.8
Medtr1g040815 Medicago truncatula HOM05D001817 ORTHO05D001647 1.3e-06 57.0 128 32.0
Medtr1g040845 Medicago truncatula HOM05D001817 ORTHO05D001647 1.3e-06 57.0 128 32.0
Phvul.009G216600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.3e-06 57.0 130 35.4
Potri.006G257600 Populus trichocarpa HOM05D001817 ORTHO05D001647 1.3e-06 57.0 80 40.0
BraA01t00588Z Brassica rapa HOM05D001817 ORTHO05D001647 1.7e-06 56.6 118 28.0
Carub.0007s0845 Capsella rubella HOM05D001817 ORTHO05D001647 1.7e-06 56.6 115 33.0
Glyma.10G114100 Glycine max HOM05D001817 ORTHO05D001647 1.7e-06 56.6 91 31.9
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.7e-06 56.6 96 34.4
A01p06720 Brassica napus HOM05D001817 ORTHO05D001647 2.2e-06 56.2 118 28.8
C01p06850 Brassica napus HOM05D001817 ORTHO05D001647 2.2e-06 56.2 118 28.0
C01p07480 Brassica napus HOM05D001817 ORTHO05D001647 2.2e-06 56.2 118 28.8
BolC1t00731H Brassica oleracea HOM05D001817 ORTHO05D001647 2.2e-06 56.2 118 28.8
Medtr5g042350 Medicago truncatula HOM05D001817 ORTHO05D001647 2.2e-06 56.2 127 30.7
VMungo0464G0399 Vigna mungo HOM05D001817 ORTHO05D001647 2.2e-06 56.2 73 37.0
Dinv24980 Davidia involucrata HOM05D001817 ORTHO05D001647 2.8e-06 55.8 93 34.4
Lj4g0011737 Lotus japonicus HOM05D001817 ORTHO05D001647 2.8e-06 55.8 101 34.7
Phvul.001G045800 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 2.8e-06 55.8 131 36.6
Lsat_1_v5_gn_6_115761 Lactuca sativa HOM05D001817 ORTHO05D001647 3.7e-06 55.5 84 33.3
Potri.004G167900 Populus trichocarpa HOM05D001817 ORTHO05D001647 3.7e-06 55.5 103 29.1
Sc23g0006630 Simmondsia chinensis HOM05D001817 ORTHO05D001647 3.7e-06 55.5 115 27.8
AL7G19810 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 4.8e-06 55.1 103 31.1
Thhalv10027525m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 4.8e-06 55.1 118 31.4
SpUn0983_0020 Schrenkiella parvula HOM05D001817 ORTHO05D001647 4.8e-06 55.1 87 36.8
TWI34G0730 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 4.8e-06 55.1 126 30.2
COL.COLO4_18892 Corchorus olitorius HOM05D001817 ORTHO05D001647 6.3e-06 54.7 90 32.2
Thhalv10009797m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 6.3e-06 54.7 124 31.5
Glyma.08G357100 Glycine max HOM05D001817 ORTHO05D001647 6.3e-06 54.7 92 39.1
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 6.3e-06 54.7 90 31.1
Sabra06G0201500 Salix brachista HOM05D001817 ORTHO05D001647 6.3e-06 54.7 86 37.2
AL7G19800 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 8.2e-06 54.3 104 31.7
CsaV3_3G046190 Cucumis sativus L. HOM05D001817 ORTHO05D001647 8.2e-06 54.3 104 27.9
Glyma.17G218100 Glycine max HOM05D001817 ORTHO05D001647 8.2e-06 54.3 112 37.5
Lsat_1_v5_gn_6_115781 Lactuca sativa HOM05D001817 ORTHO05D001647 8.2e-06 54.3 89 32.6
Lj4g0019656 Lotus japonicus HOM05D001817 ORTHO05D001647 8.2e-06 54.3 102 31.4
Lalb_Chr07g0186891 Lupinus albus HOM05D001817 ORTHO05D001647 8.2e-06 54.3 97 32.0
TAR371G0865 Trochodendron aralioides HOM05D001817 ORTHO05D001647 8.2e-06 54.3 99 30.3


User provided reference genes

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