Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 9.5e-198 693.3 357 100.0
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.6e-192 676.0 357 97.8
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.8e-117 425.2 364 65.9
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.8e-116 423.3 365 62.7
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 2.7e-112 409.5 367 63.2
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 6.1e-104 381.7 384 59.1
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 2.0e-102 376.7 376 59.0
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 5.9e-99 365.2 386 56.7
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.9e-97 360.1 384 54.4
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 6.1e-96 355.1 384 53.6
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.0e-94 350.1 368 55.7
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 9.8e-94 347.8 390 54.6
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 7.7e-91 338.2 387 54.8
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 1.6e-88 330.5 345 53.6
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.0e-87 326.2 342 55.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 6.8e-87 325.1 352 52.8
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.5e-86 323.9 373 52.0
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.0e-86 323.6 370 51.1
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.0e-86 323.6 383 51.4
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 4.4e-86 322.4 393 49.6
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 7.5e-86 321.6 383 51.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 4.9e-85 318.9 381 51.4
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 6.3e-85 318.5 346 52.9
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 1.4e-84 317.4 395 51.4
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.4e-84 316.6 367 50.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 7.0e-84 315.1 373 51.2
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.0e-83 313.5 364 51.9
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 7.8e-83 311.6 378 49.2
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 1.7e-82 310.5 373 52.0
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 6.6e-82 308.5 383 50.1
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.5e-81 306.6 377 50.1
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.3e-81 305.8 344 52.0
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 7.3e-81 305.1 344 49.7
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.2e-80 304.3 369 49.6
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.6e-80 303.9 344 52.0
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.6e-80 302.8 361 51.0
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.6e-80 302.8 375 48.3
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.7e-80 302.4 344 50.3
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 6.1e-80 302.0 373 49.6
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 6.1e-80 302.0 393 49.1
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.0e-79 301.2 395 48.6
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.0e-79 301.2 344 51.7
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 1.4e-79 300.8 383 49.6
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.4e-79 300.8 352 50.0
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.8e-79 300.4 369 50.4
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 3.0e-79 299.7 391 50.9
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 4.0e-79 299.3 344 50.0
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 6.8e-79 298.5 344 49.4
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 8.9e-79 298.1 428 44.9
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 2.6e-78 296.6 392 47.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 2.6e-78 296.6 384 49.5
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.8e-76 290.4 355 51.5
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 5.9e-75 285.4 366 48.6
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 7.8e-75 285.0 380 49.2
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-74 284.6 366 47.3
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-74 284.6 366 47.3
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.3e-74 284.3 426 43.9
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.3e-74 284.3 375 49.1
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.7e-74 283.9 342 48.5
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.3e-74 283.5 365 45.2
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 6.6e-74 282.0 340 48.5
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 7.3e-73 278.5 369 45.5
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 1.2e-72 277.7 340 47.1
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 6.2e-72 275.4 373 45.0
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 2.3e-71 273.5 382 44.8
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 8.9e-71 271.6 366 45.6
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 8.9e-71 271.6 321 51.7
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.5e-70 270.8 366 45.9
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.6e-70 270.0 370 44.9
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.7e-69 267.3 350 45.4
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 3.2e-68 263.1 370 43.2
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 7.0e-68 261.9 363 45.2
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 6.0e-67 258.8 456 42.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 3.9e-66 256.1 362 43.1
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 8.6e-66 255.0 386 44.8
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.5e-65 254.2 305 49.8
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 4.3e-65 252.7 265 55.5
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.1e-64 250.4 346 46.2
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 1.1e-63 248.1 404 39.1
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 4.4e-62 242.7 362 44.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 2.9e-61 240.0 418 43.1
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.9e-61 240.0 357 44.0
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.9e-60 237.3 167 72.5
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 4.1e-60 236.1 297 47.8
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 9.2e-60 235.0 327 44.3
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 2.7e-59 233.4 331 44.4
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 6.6e-58 228.8 338 43.2
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 6.6e-58 228.8 327 42.2
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 6.6e-58 228.8 297 46.5
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 6.6e-58 228.8 359 40.9
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 5.6e-57 225.7 361 41.6
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 9.5e-57 224.9 331 42.6
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 2.8e-56 223.4 373 40.8
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 1.1e-55 221.5 367 40.6
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 1.1e-55 221.5 367 40.6
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 3.1e-55 219.9 310 47.1
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 8.9e-55 218.4 366 40.4
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 9.9e-54 214.9 364 40.9
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.2e-53 213.8 379 38.3
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.4e-52 211.1 337 40.4
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 4.1e-52 209.5 269 48.0
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 6.6e-50 202.2 303 46.5
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 5.2e-47 192.6 324 39.5
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 5.2e-47 192.6 324 39.5
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 5.2e-47 192.6 324 39.5
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 5.2e-47 192.6 307 41.7
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 6.9e-47 192.2 379 36.9
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 6.9e-47 192.2 307 41.0
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 7.6e-46 188.7 343 37.3
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 5.4e-44 182.6 266 41.4
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 7.1e-44 182.2 327 39.4
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 7.1e-44 182.2 327 39.4
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.0e-42 176.8 382 39.5
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 6.9e-39 165.6 304 41.8
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 2.3e-34 150.6 380 31.8
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.6e-24 117.9 321 31.5
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 3.2e-20 103.6 151 42.4
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 7.9e-19 99.0 363 27.0
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.2e-16 90.9 392 24.7
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.8e-15 87.8 218 30.7
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 1.5e-14 84.7 92 51.1
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.5e-14 84.7 46 78.3
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.1e-12 78.6 339 25.4
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 2.3e-10 70.9 65 56.9
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 4.3e-09 66.6 47 66.0
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 2.0e-06 57.8 312 24.0
Oeu039353.1 Olea europaea HOM05D005771 ORTHO05D045073 4.5e-06 56.6 50 72.0


User provided reference genes

Program Settings