Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.0e-125 453.4 220 100.0
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.8e-123 445.3 220 98.6
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 3.0e-109 398.7 220 83.6
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 3.9e-109 398.3 220 83.6
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 8.6e-109 397.1 220 84.1
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 7.3e-108 394.0 218 83.9
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 2.8e-107 392.1 220 81.4
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.1e-106 390.2 218 83.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.4e-106 389.8 218 83.9
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.2e-105 386.7 218 83.5
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.5e-105 386.3 220 81.4
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.0e-105 386.0 218 81.7
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.6e-105 385.6 220 80.9
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.6e-105 385.6 220 83.6
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 3.4e-105 385.2 218 83.0
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 3.4e-105 385.2 218 81.7
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 7.6e-105 384.0 218 81.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.3e-104 383.3 218 81.7
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-104 381.7 218 79.4
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 3.8e-104 381.7 217 80.6
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 6.4e-104 380.9 219 80.8
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 6.4e-104 380.9 220 82.3
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.1e-103 380.2 220 80.0
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 1.9e-103 379.4 218 79.8
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.9e-103 379.4 218 80.3
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.4e-103 379.0 218 79.8
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 2.4e-103 379.0 218 79.4
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.2e-103 378.6 218 78.4
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 5.4e-103 377.9 220 78.6
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 7.1e-103 377.5 220 79.5
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 7.1e-103 377.5 220 78.6
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 7.1e-103 377.5 218 78.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.2e-102 376.7 220 80.0
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.6e-102 376.3 218 79.4
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 1.6e-102 376.3 220 79.5
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.1e-102 375.9 218 79.8
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.1e-102 375.9 219 80.4
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 2.1e-102 375.9 219 80.4
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.1e-102 375.9 220 79.5
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.1e-102 375.9 220 80.0
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 2.7e-102 375.6 218 78.4
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 3.5e-102 375.2 219 80.8
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 6.0e-102 374.4 219 79.9
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 6.0e-102 374.4 217 78.8
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-101 373.2 221 79.6
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-101 373.2 221 79.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.3e-101 373.2 221 79.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 1.3e-101 373.2 221 79.2
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.3e-101 373.2 218 76.6
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.7e-101 372.9 218 77.1
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.7e-101 372.9 218 77.5
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.7e-101 372.9 218 78.4
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.7e-101 372.9 217 82.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.3e-101 372.5 218 78.0
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.0e-101 372.1 218 77.5
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.0e-101 372.1 220 79.5
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.9e-101 371.7 221 79.2
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 6.6e-101 370.9 220 79.1
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.7e-101 370.5 218 77.5
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.1e-100 370.2 219 79.0
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.9e-100 369.4 221 78.7
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.5e-100 369.0 220 79.1
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.5e-100 369.0 219 78.5
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 3.3e-100 368.6 220 77.7
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 3.3e-100 368.6 218 75.7
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.3e-100 368.2 219 78.5
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 4.3e-100 368.2 220 79.1
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 5.6e-100 367.9 220 78.2
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 5.6e-100 367.9 220 78.6
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.3e-99 366.7 218 75.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.8e-99 365.5 220 78.2
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 6.2e-99 364.4 219 78.5
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.8e-98 362.8 221 76.5
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 4.0e-98 361.7 220 77.7
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 9.0e-98 360.5 220 75.0
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.2e-97 360.1 220 74.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.5e-97 359.8 220 77.3
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.6e-97 359.0 224 75.4
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 4.4e-97 358.2 220 75.0
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.4e-97 358.2 220 74.5
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 4.4e-97 358.2 229 73.4
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 7.6e-97 357.5 219 77.2
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 3.8e-96 355.1 219 75.8
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 4.9e-96 354.8 219 74.9
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 7.9e-94 347.4 218 76.1
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.3e-93 346.7 223 71.7
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 9.6e-92 340.5 281 59.4
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.8e-90 336.3 218 73.4
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 5.3e-90 334.7 220 73.2
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 9.3e-87 323.9 218 70.2
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 2.1e-86 322.8 221 71.9
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 4.3e-84 315.1 201 73.1
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 6.9e-82 307.8 219 66.7
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.3e-77 292.7 217 62.7
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.3e-77 292.7 217 62.7
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.6e-75 286.6 222 63.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.8e-75 285.8 219 63.9
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.4e-74 282.7 225 60.0
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.5e-71 272.7 161 78.9
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 3.1e-66 255.8 183 66.1
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-63 247.3 145 78.6
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 8.8e-61 237.7 221 52.9
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 5.9e-57 224.9 136 79.4
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.0e-56 224.2 120 81.7
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 9.4e-55 217.6 141 73.8
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 5.9e-49 198.4 118 78.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.7e-48 196.8 208 47.6
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.7e-48 196.8 220 42.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.0e-48 195.3 119 76.5
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.8e-34 150.2 120 59.2
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.8e-34 150.2 120 59.2
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.6e-30 136.0 78 74.4
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.1e-30 135.2 70 87.1
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.0e-29 132.9 113 55.8
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 5.0e-24 115.5 68 76.5
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.0e-21 106.3 73 64.4
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.2e-20 104.4 64 75.0
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 3.2e-18 96.3 53 81.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.1e-10 71.2 120 30.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.9e-07 60.5 59 42.4
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.6e-06 56.2 41 58.5


User provided reference genes

Program Settings