Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00789 Erythranthe guttata HOM05D001903 ORTHO05D001847 3.3e-48 194.9 111 100.0
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 1.4e-30 136.3 101 84.2
Potri.006G254300 Populus trichocarpa HOM05D001903 ORTHO05D001847 1.0e-12 77.0 96 41.7
Sabra06G0198700 Salix brachista HOM05D001903 ORTHO05D001847 1.0e-12 77.0 80 47.5
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 1.4e-11 73.2 103 49.5
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 2.5e-11 72.4 103 49.5
Eucgr.C02775 Eucalyptus grandis HOM05D001903 ORTHO05D001847 4.2e-11 71.6 84 44.0
Aa31LG4G420 Aethionema arabicum HOM05D001903 ORTHO05D001847 5.5e-11 71.2 99 36.4
BolC1t00658H Brassica oleracea HOM05D001903 ORTHO05D001847 1.2e-10 70.1 94 40.4
AL2G41400 Arabidopsis lyrata HOM05D001903 ORTHO05D001847 4.6e-10 68.2 81 44.4
AT1G80130 Arabidopsis thaliana HOM05D001903 ORTHO05D001847 4.6e-10 68.2 92 42.4
Nitab4.5_0000373g0030 Nicotiana tabacum HOM05D001903 ORTHO05D001847 4.6e-10 68.2 83 60.2
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 4.6e-10 68.2 81 56.8
A01p06030 Brassica napus HOM05D001903 ORTHO05D001847 6.1e-10 67.8 79 44.3
BraA01t00568Z Brassica rapa HOM05D001903 ORTHO05D001847 6.1e-10 67.8 79 44.3
Thhalv10026052m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 1.4e-09 66.6 77 44.2
C01p06630 Brassica napus HOM05D001903 ORTHO05D001847 3.9e-09 65.1 78 43.6
CAN.G1503.5 Capsicum annuum HOM05D001903 ORTHO05D001847 3.9e-09 65.1 88 42.0
PGR044G1481 Punica granatum HOM05D001903 ORTHO05D001847 5.1e-09 64.7 80 42.5
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 8.8e-09 63.9 44 70.5
BcaC09g52017 Brassica carinata HOM05D001903 ORTHO05D001847 1.1e-08 63.5 77 42.9
Cpa.g.sc10.261 Carica papaya HOM05D001903 ORTHO05D001847 1.1e-08 63.5 88 38.6
PGR044G1754 Punica granatum HOM05D001903 ORTHO05D001847 1.9e-08 62.8 80 41.2
Sp7g30100 Schrenkiella parvula HOM05D001903 ORTHO05D001847 1.9e-08 62.8 98 38.8
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 5.7e-08 61.2 76 53.9
FAN13G0942 Fragaria x ananassa HOM05D031544 ORTHO05D001847 5.7e-08 61.2 40 72.5
Lalb_Chr06g0169541 Lupinus albus HOM05D006910 ORTHO05D008937 7.4e-08 60.8 82 36.6
Nitab4.5_0000209g0150 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.3e-07 60.1 46 60.9
Nitab4.5_0008073g0040 Nicotiana tabacum HOM05D009844 ORTHO05D007252 1.3e-07 60.1 43 65.1
Hma1.2p1_0366F.1_g136940 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 1.7e-07 59.7 94 35.1
THA.LOC104803660 Tarenaya hassleriana HOM05D001903 ORTHO05D001847 2.8e-07 58.9 84 46.4
AUR62007306 Chenopodium quinoa HOM05D031544 ORTHO05D001847 3.7e-07 58.5 41 70.7
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 4.8e-07 58.2 95 30.5
Carub.0001s0374 Capsella rubella HOM05D006910 ORTHO05D008937 6.3e-07 57.8 77 32.5
BcaC03g16002 Brassica carinata HOM05D001903 ORTHO05D001847 8.2e-07 57.4 79 48.1
BolC2t09769H Brassica oleracea HOM05D001903 ORTHO05D001847 8.2e-07 57.4 79 48.1
SEGI_24294 Sequoiadendron giganteum HOM05D006910 ORTHO05D008937 8.2e-07 57.4 47 57.4
C02p37590 Brassica napus HOM05D001903 ORTHO05D001847 1.1e-06 57.0 79 44.3
Actinidia14059 Actinidia chinensis HOM05D001903 ORTHO05D001847 1.4e-06 56.6 46 63.0
AUR62011143 Chenopodium quinoa HOM05D001903 ORTHO05D001847 1.4e-06 56.6 43 65.1
Hma1.2p1_0018F.1_g012310 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 1.4e-06 56.6 48 60.4
Carub.0002s2739 Capsella rubella HOM05D001903 ORTHO05D001847 1.8e-06 56.2 79 51.9
Rhsim03G0248500 Rhododendron simsii HOM05D001903 ORTHO05D001847 1.8e-06 56.2 43 67.4
Rhsim07G0128800 Rhododendron simsii HOM05D031544 ORTHO05D001847 1.8e-06 56.2 42 64.3
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 2.4e-06 55.8 42 61.9
CSS0008588 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 3.1e-06 55.5 89 36.0
COL.COLO4_24106 Corchorus olitorius HOM05D031544 ORTHO05D007768 3.1e-06 55.5 36 75.0
Cfa010644 Carpinus fangiana HOM05D001903 ORTHO05D001847 5.3e-06 54.7 43 62.8
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 5.3e-06 54.7 46 52.2
CsaV3_3G011640 Cucumis sativus L. HOM05D006910 ORTHO05D008937 6.9e-06 54.3 87 32.2
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 6.9e-06 54.3 39 61.5
A02p23820 Brassica napus HOM05D001903 ORTHO05D001847 9.1e-06 53.9 79 49.4
BraA02t07373Z Brassica rapa HOM05D001903 ORTHO05D001847 9.1e-06 53.9 79 49.4
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 9.1e-06 53.9 91 37.4
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 9.1e-06 53.9 43 55.8


User provided reference genes

Program Settings