Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 7.0e-262 906.7 458 100.0
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 4.0e-132 475.7 284 86.6
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.4e-89 334.3 390 51.8
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 8.7e-71 271.9 485 38.4
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 5.7e-70 269.2 303 48.5
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 3.4e-67 260.0 353 42.8
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.3e-66 258.1 397 41.6
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.0e-63 248.4 331 45.0
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.4e-63 248.1 257 52.1
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.8e-63 247.7 288 49.0
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.8e-63 247.7 250 54.0
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 9.7e-62 241.9 246 53.3
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 3.7e-61 240.0 265 47.2
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 1.4e-60 238.0 341 41.6
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-60 238.0 276 46.0
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 2.4e-60 237.3 277 45.5
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 5.3e-60 236.1 274 48.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 6.9e-60 235.7 361 40.7
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.0e-59 234.2 335 41.5
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 4.5e-59 233.0 279 45.9
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.7e-58 231.1 249 48.2
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 2.2e-58 230.7 281 47.7
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 3.8e-58 229.9 290 44.1
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 5.0e-58 229.6 383 38.4
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 6.5e-58 229.2 249 53.0
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 8.5e-58 228.8 277 44.4
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 8.5e-58 228.8 295 44.7
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.1e-57 228.4 281 46.6
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.9e-57 227.6 374 39.0
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 3.2e-57 226.9 244 52.5
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 9.4e-57 225.3 261 47.9
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 2.1e-56 224.2 281 46.6
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 7.9e-56 222.2 249 48.6
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 1.4e-55 221.5 343 41.1
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.4e-55 221.5 269 46.5
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.8e-55 221.1 375 38.1
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 3.0e-55 220.3 346 40.5
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 3.9e-55 219.9 318 41.2
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 5.1e-55 219.5 265 46.4
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 5.1e-55 219.5 248 47.2
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 1.1e-54 218.4 465 36.1
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 2.6e-54 217.2 298 44.3
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 2.6e-54 217.2 294 43.2
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.6e-54 217.2 286 44.8
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 3.3e-54 216.9 403 36.5
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 1.3e-53 214.9 271 45.8
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.4e-52 210.7 297 40.7
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 7.0e-52 209.1 301 41.2
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.2e-51 208.4 271 44.3
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.6e-51 207.2 255 45.9
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 7.7e-51 205.7 389 38.6
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 1.9e-49 201.1 333 38.7
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-48 198.4 255 44.7
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-48 197.6 255 44.7
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.4e-47 194.9 333 38.7
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 2.3e-47 194.1 248 45.2
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 2.3e-47 194.1 261 42.9
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 2.0e-46 191.0 392 34.9
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 1.7e-45 188.0 271 42.8
Migut.E01650 Erythranthe guttata HOM05D005777 ORTHO05D006854 3.1e-44 183.7 139 74.8
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 4.1e-44 183.3 279 39.4
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 7.0e-44 182.6 293 39.6
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-43 181.4 243 43.6
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.5e-43 179.9 292 38.7
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 5.0e-42 176.4 252 42.9
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 3.2e-41 173.7 355 34.1
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.2e-41 172.6 213 46.5
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 8.8e-39 165.6 427 30.7
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 3.3e-38 163.7 350 36.6
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.3e-37 161.8 276 38.4
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.3e-37 161.8 244 40.2
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-36 157.5 358 32.1
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.1e-36 157.1 237 39.2
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.0e-35 154.5 225 40.0
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 3.5e-35 153.7 241 40.7
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 5.0e-34 149.8 207 40.6
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 4.2e-33 146.7 247 38.1
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 5.5e-33 146.4 123 56.9
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 2.1e-32 144.4 428 28.5
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 4.4e-30 136.7 141 50.4
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 1.3e-29 135.2 463 30.2
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 9.1e-28 129.0 209 38.8
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.5e-27 127.1 298 33.6
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 5.9e-27 126.3 168 45.8
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.5e-25 120.9 183 42.1
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.2e-25 119.4 183 41.5
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-24 118.6 174 43.1
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-24 118.2 183 41.5
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 2.8e-24 117.5 173 42.2
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.7e-24 116.7 137 47.4
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 4.7e-24 116.7 173 42.8
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 3.0e-23 114.0 158 43.0
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 4.4e-22 110.2 173 41.0
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.5e-22 109.4 100 52.0
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 2.2e-21 107.8 151 44.4
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 2.8e-21 107.5 179 39.1
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.8e-21 107.5 138 42.0
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 4.9e-21 106.7 158 42.4
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 1.4e-20 105.1 151 43.0
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 1.4e-20 105.1 160 38.8
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.8e-20 104.8 250 32.0
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-20 103.6 101 49.5
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 7.0e-20 102.8 151 43.0
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 9.2e-20 102.4 70 64.3
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 1.6e-19 101.7 151 42.4
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.7e-19 100.9 106 48.1
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.7e-19 100.9 301 28.9
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.5e-19 100.5 428 26.6
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 7.8e-19 99.4 136 41.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.0e-18 99.0 167 41.9
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 1.0e-18 99.0 179 37.4
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 2.9e-18 97.4 151 41.1
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.8e-18 97.1 72 61.1
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 4.3e-17 93.6 279 31.2
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-15 88.6 89 49.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 9.8e-14 82.4 127 41.7
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.9e-12 78.2 77 53.2
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 6.2e-08 63.2 86 38.4
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 1.1e-07 62.4 52 51.9
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.1e-07 62.4 81 39.5
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.5e-06 58.5 76 38.2
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.4e-06 57.4 35 71.4
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 3.4e-06 57.4 43 60.5
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 9.8e-06 55.8 35 68.6


User provided reference genes

Program Settings