Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 5.2e-122 441.0 220 100.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.9e-104 381.3 205 95.1
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.9e-79 299.7 221 70.1
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.5e-68 263.5 230 61.7
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.4e-66 256.9 226 61.9
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 9.0e-66 254.2 220 62.3
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 9.0e-66 254.2 225 63.1
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 2.6e-65 252.7 225 60.9
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 5.9e-65 251.5 225 60.9
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.3e-64 250.4 226 60.6
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.7e-64 250.0 166 74.7
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 3.8e-64 248.8 225 60.4
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 5.0e-64 248.4 230 58.3
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 6.5e-64 248.1 225 60.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 8.5e-64 247.7 208 63.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 1.1e-63 247.3 207 66.2
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.4e-63 246.9 226 63.7
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.9e-63 246.5 207 66.2
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.5e-63 246.1 226 59.7
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 3.2e-63 245.7 225 60.0
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 7.2e-63 244.6 225 58.7
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.6e-62 243.4 226 60.2
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.6e-62 243.4 188 67.0
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.1e-62 243.0 241 58.9
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 4.6e-62 241.9 179 69.8
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 7.9e-62 241.1 169 74.6
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 7.9e-62 241.1 226 59.7
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 7.9e-62 241.1 208 68.3
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.4e-61 240.4 175 70.9
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.8e-61 240.0 218 60.6
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 3.0e-61 239.2 164 73.2
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 6.7e-61 238.0 233 59.7
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 6.7e-61 238.0 151 80.1
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 6.7e-61 238.0 161 73.3
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 8.8e-61 237.7 158 77.2
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.1e-60 237.3 207 62.8
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.5e-60 236.9 223 58.7
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.5e-60 236.9 226 58.8
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.5e-60 236.9 161 75.8
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 1.5e-60 236.9 210 63.3
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 2.0e-60 236.5 161 74.5
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.0e-60 236.5 226 58.8
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.0e-60 236.5 226 58.8
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 2.0e-60 236.5 233 59.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 2.6e-60 236.1 161 75.2
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.6e-60 236.1 228 56.1
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.6e-60 236.1 217 59.4
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.3e-60 235.7 226 59.3
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.7e-60 235.0 155 76.8
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 5.7e-60 235.0 161 75.2
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.7e-59 233.4 229 58.1
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.7e-59 233.4 212 61.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 2.2e-59 233.0 229 59.0
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.2e-59 233.0 224 56.7
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 2.8e-59 232.6 169 69.2
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 6.3e-59 231.5 212 60.8
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 6.3e-59 231.5 161 72.0
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 8.2e-59 231.1 143 80.4
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.1e-58 230.7 226 60.6
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.8e-58 229.9 195 63.6
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.4e-58 229.6 170 68.2
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.4e-58 229.6 188 65.4
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 3.1e-58 229.2 224 57.1
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.2e-57 227.3 155 73.5
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.2e-57 227.3 155 73.5
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.2e-57 227.3 155 73.5
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.2e-57 227.3 155 73.5
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 2.0e-57 226.5 155 73.5
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 2.6e-57 226.1 185 65.4
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 3.4e-57 225.7 193 63.7
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 4.5e-57 225.3 137 79.6
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 4.5e-57 225.3 158 72.2
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 5.9e-57 224.9 160 72.5
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.3e-56 223.8 229 55.5
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 8.5e-56 221.1 131 80.9
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.9e-55 219.9 158 71.5
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.9e-55 219.9 158 71.5
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 4.2e-55 218.8 155 72.3
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 4.2e-55 218.8 155 72.3
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.6e-54 216.9 149 76.5
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.0e-53 214.2 154 72.1
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.0e-53 214.2 154 72.1
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.5e-52 210.3 156 70.5
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 4.4e-52 208.8 123 79.7
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 2.8e-51 206.1 147 72.1
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.8e-50 203.4 182 61.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 5.3e-50 201.8 122 79.5
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.6e-49 199.5 150 68.7
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 3.5e-49 199.1 192 60.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 7.7e-49 198.0 152 67.1
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.9e-48 196.1 153 65.4
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 5.5e-47 191.8 159 60.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.6e-46 190.3 139 70.5
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 8.0e-46 188.0 161 62.1
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 2.6e-44 183.0 170 58.8
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 5.2e-37 158.7 227 47.1
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.3e-35 154.1 124 58.9
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.1e-34 151.0 168 52.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 3.8e-32 142.5 134 59.0
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 5.5e-31 138.7 176 48.9
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.2e-25 120.9 122 56.6
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.2e-20 104.4 61 80.3
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 7.5e-20 101.7 91 60.4
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.2e-19 100.1 53 84.9
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.1e-18 97.8 81 64.2
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 2.7e-17 93.2 113 45.1
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.7e-16 90.5 67 67.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 6.8e-13 78.6 110 34.5
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.6e-09 67.4 101 36.6
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.0e-08 64.7 45 71.1
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 8.6e-08 61.6 45 68.9


User provided reference genes

Program Settings