Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00657 Erythranthe guttata HOM05D007431 ORTHO05D008438 1.5e-65 253.4 154 100.0
Migut.E00592 Erythranthe guttata HOM05D007431 ORTHO05D008438 2.3e-58 229.6 154 92.2
Oeu006325.1 Olea europaea HOM05D007431 ORTHO05D008438 3.7e-16 89.4 87 59.8
SalBow2G1074 Salvia bowleyana HOM05D015294 ORTHO05D008438 3.1e-15 86.3 64 71.9
Migut.B00697 Erythranthe guttata HOM05D007431 ORTHO05D008438 4.1e-15 85.9 53 83.0
SGA_v2.0_scaffold65G22165 Striga asiatica HOM05D007431 ORTHO05D008438 4.1e-15 85.9 100 53.0
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 2.0e-09 67.0 57 52.6
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 5.7e-09 65.5 73 50.7
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 2.2e-08 63.5 98 45.9
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 2.2e-08 63.5 62 50.0
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 2.8e-08 63.2 57 54.4
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 4.8e-08 62.4 58 44.8
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 4.8e-08 62.4 92 46.7
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 4.8e-08 62.4 69 49.3
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 6.3e-08 62.0 78 47.4
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 8.3e-08 61.6 88 38.6
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 8.3e-08 61.6 88 38.6
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 8.3e-08 61.6 90 36.7
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 1.1e-07 61.2 78 43.6
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.1e-07 61.2 72 45.8
unitig_8.g4027 Utricularia gibba HOM05D007431 ORTHO05D008438 1.1e-07 61.2 67 52.2
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.4e-07 60.8 69 44.9
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 1.4e-07 60.8 90 44.4
Nitab4.5_0004839g0050 Nicotiana tabacum HOM05D015294 ORTHO05D018867 1.4e-07 60.8 87 43.7
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.4e-07 60.8 62 50.0
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 1.8e-07 60.5 58 50.0
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.8e-07 60.5 55 52.7
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 2.4e-07 60.1 76 44.7
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 2.4e-07 60.1 102 41.2
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 2.4e-07 60.1 70 44.3
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 3.1e-07 59.7 62 46.8
Peaxi162Scf00616g00064 Petunia axillaris HOM05D015294 ORTHO05D018867 4.1e-07 59.3 57 49.1
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 5.4e-07 58.9 67 44.8
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 5.4e-07 58.9 96 35.4
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 5.4e-07 58.9 71 45.1
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 5.4e-07 58.9 113 38.9
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 7.0e-07 58.5 68 45.6
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 7.0e-07 58.5 69 43.5
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 7.0e-07 58.5 57 50.9
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 7.0e-07 58.5 55 49.1
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 9.1e-07 58.2 81 42.0
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 1.2e-06 57.8 62 45.2
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 1.2e-06 57.8 57 49.1
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 1.6e-06 57.4 82 45.1
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.6e-06 57.4 81 42.0
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 2.0e-06 57.0 102 36.3
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 2.7e-06 56.6 70 41.4
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 2.7e-06 56.6 86 39.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 3.5e-06 56.2 97 37.1
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 3.5e-06 56.2 91 34.1
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 4.5e-06 55.8 55 45.5
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 4.5e-06 55.8 57 47.4
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 4.5e-06 55.8 61 47.5
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 4.5e-06 55.8 72 41.7
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 5.9e-06 55.5 85 37.6
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 5.9e-06 55.5 96 36.5
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 5.9e-06 55.5 72 43.1
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 7.7e-06 55.1 57 47.4
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 7.7e-06 55.1 98 32.7
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 7.7e-06 55.1 97 37.1
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 7.7e-06 55.1 88 39.8
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 7.7e-06 55.1 69 40.6


User provided reference genes

Program Settings