Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 8.1e-42 173.3 88 100.0
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.0e-23 113.2 91 63.7
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.0e-23 113.2 91 65.9
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.0e-23 113.2 91 65.9
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.3e-23 112.8 91 65.9
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 2.2e-23 112.1 91 64.8
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 2.2e-23 112.1 91 64.8
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 2.2e-23 112.1 91 64.8
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.9e-23 111.7 91 63.7
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 2.9e-23 111.7 91 63.7
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.9e-23 111.7 91 64.8
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 4.9e-23 110.9 93 60.2
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 6.5e-23 110.5 91 63.7
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 8.4e-23 110.2 91 63.7
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.5e-22 108.6 91 64.8
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 2.5e-22 108.6 91 63.7
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 9.3e-22 106.7 94 60.6
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 6.1e-21 104.0 93 59.1
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 7.9e-21 103.6 88 62.5
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.0e-20 103.2 96 59.4
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 1.0e-20 103.2 92 62.0
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 1.3e-20 102.8 88 63.6
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.3e-20 102.8 88 59.1
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.0e-20 101.7 91 60.4
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 3.9e-20 101.3 92 62.0
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 5.1e-20 100.9 92 57.6
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 5.1e-20 100.9 94 60.6
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 5.1e-20 100.9 87 58.6
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 6.7e-20 100.5 91 58.2
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 6.7e-20 100.5 89 62.9
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 6.7e-20 100.5 97 55.7
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 6.7e-20 100.5 91 59.3
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 8.7e-20 100.1 96 59.4
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 8.7e-20 100.1 93 57.0
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 8.7e-20 100.1 96 58.3
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 1.1e-19 99.8 91 60.4
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 1.5e-19 99.4 92 58.7
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 1.9e-19 99.0 90 60.0
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 1.9e-19 99.0 89 61.8
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 2.5e-19 98.6 90 58.9
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.5e-19 98.6 90 60.0
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 3.3e-19 98.2 91 59.3
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 3.3e-19 98.2 96 59.4
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 4.3e-19 97.8 91 58.2
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 4.3e-19 97.8 91 58.2
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 4.3e-19 97.8 89 61.8
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 4.3e-19 97.8 91 58.2
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 4.3e-19 97.8 85 61.2
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 5.7e-19 97.4 93 58.1
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 5.7e-19 97.4 90 55.6
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 5.7e-19 97.4 91 58.2
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 7.4e-19 97.1 93 55.9
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 7.4e-19 97.1 90 60.0
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 7.4e-19 97.1 91 59.3
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 7.4e-19 97.1 90 61.1
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 9.7e-19 96.7 93 57.0
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 9.7e-19 96.7 90 58.9
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 1.6e-18 95.9 92 58.7
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.6e-18 95.9 93 57.0
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 2.2e-18 95.5 91 54.9
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 4.8e-18 94.4 90 56.7
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 6.3e-18 94.0 95 57.9
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 8.2e-18 93.6 79 55.7
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.8e-17 92.4 72 63.9
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.8e-17 92.4 94 54.3
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 2.4e-17 92.0 65 66.2
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 4.1e-17 91.3 98 54.1
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 5.3e-17 90.9 94 53.2
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 6.9e-17 90.5 100 51.0
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 6.9e-17 90.5 96 53.1
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 6.9e-17 90.5 92 55.4
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 9.0e-17 90.1 84 58.3
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.2e-16 89.7 95 53.7
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.2e-16 89.7 90 53.3
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.5e-16 89.4 81 58.0
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 2.0e-16 89.0 78 56.4
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 3.4e-16 88.2 98 53.1
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 3.4e-16 88.2 91 52.7
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 4.5e-16 87.8 62 62.9
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 7.7e-16 87.0 92 53.3
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 1.0e-15 86.7 100 54.0
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.3e-15 86.3 92 55.4
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 3.8e-15 84.7 91 54.9
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 6.5e-15 84.0 99 51.5
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.4e-14 82.8 100 53.0
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 1.4e-14 82.8 90 50.0
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 5.5e-14 80.9 60 68.3
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 5.5e-14 80.9 69 62.3
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 1.2e-13 79.7 99 51.5
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.6e-13 79.3 88 51.1
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 1.6e-13 79.3 79 53.2
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 2.7e-13 78.6 89 47.2
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 6.1e-13 77.4 81 51.9
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 2.3e-12 75.5 63 57.1
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.3e-12 75.5 60 63.3
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 3.0e-12 75.1 60 56.7
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 6.7e-12 73.9 60 61.7
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 6.7e-12 73.9 62 56.5
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 1.1e-11 73.2 70 52.9
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.1e-11 73.2 101 44.6
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 1.5e-11 72.8 60 56.7
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 4.3e-11 71.2 68 52.9
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-10 69.7 67 49.3
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-10 69.7 67 49.3
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-10 69.7 67 49.3
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-10 69.7 67 49.3
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-10 69.3 66 50.0
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-10 69.3 66 50.0
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 2.2e-10 68.9 60 50.0
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 2.2e-10 68.9 75 46.7
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.7e-10 68.2 63 52.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.7e-10 68.2 64 53.1
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 6.3e-10 67.4 64 51.6
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.8e-09 65.9 65 47.7
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 3.1e-09 65.1 66 51.5
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 5.3e-09 64.3 66 48.5
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 5.3e-09 64.3 64 50.0
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 6.9e-09 63.9 65 50.8
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 1.2e-08 63.2 64 48.4
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 1.5e-08 62.8 74 45.9
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 2.0e-08 62.4 63 49.2
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 2.0e-08 62.4 63 49.2
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 2.0e-08 62.4 63 49.2
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 2.0e-08 62.4 63 49.2
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 2.0e-08 62.4 60 48.3
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 3.8e-07 58.2 48 52.1
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.5e-07 57.4 63 46.0
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 8.5e-07 57.0 63 46.0
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.1e-06 56.6 64 48.4
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.9e-06 55.8 58 43.1
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.9e-06 55.8 63 44.4
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.9e-06 55.8 64 48.4
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.2e-06 55.1 63 44.4
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 7.2e-06 53.9 64 46.9
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 7.2e-06 53.9 64 46.9
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 7.2e-06 53.9 64 46.9


User provided reference genes

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