Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 0.0e+00 1275.0 749 100.0
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 7.7e-242 840.9 781 69.3
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 1.2e-213 747.3 796 64.7
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 3.8e-156 556.2 744 56.7
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.4e-155 554.3 563 66.3
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-153 547.7 745 55.4
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.5e-149 534.3 782 51.9
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 5.7e-144 515.8 743 53.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 2.0e-141 507.3 743 52.5
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.6e-136 490.3 726 52.1
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.3e-135 488.0 726 51.2
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 2.2e-135 487.3 780 50.3
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 3.1e-134 483.4 725 52.0
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.1e-130 470.7 738 50.9
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.7e-130 470.3 681 53.6
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 4.7e-130 469.5 741 51.1
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.0e-129 468.4 780 48.3
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 2.3e-129 467.2 703 50.6
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.7e-127 459.9 723 50.9
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 8.5e-124 448.7 803 46.3
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.5e-123 446.0 759 49.0
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 5.5e-123 446.0 738 50.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 9.4e-123 445.3 758 48.0
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.6e-122 444.5 851 46.3
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 1.0e-121 441.8 717 48.3
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.0e-121 439.9 665 51.3
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 6.8e-121 439.1 711 50.6
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.5e-120 438.0 630 42.7
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 5.7e-120 436.0 714 49.3
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.2e-119 434.1 613 43.6
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.0e-117 427.6 614 42.0
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 2.7e-117 427.2 716 49.6
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 2.2e-116 424.1 665 51.3
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 6.5e-116 422.5 606 42.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.1e-115 421.8 629 41.7
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.6e-114 417.9 740 47.2
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 6.1e-114 416.0 726 47.7
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 6.8e-113 412.5 724 47.5
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 6.8e-113 412.5 724 47.9
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.6e-112 410.6 765 46.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 4.4e-112 409.8 706 49.6
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 3.1e-110 403.7 700 48.7
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.2e-109 401.7 622 52.9
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.2e-109 401.7 610 42.3
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.0e-109 401.0 582 43.5
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.9e-108 397.1 687 48.3
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.8e-108 396.7 591 41.6
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 8.6e-108 395.6 715 47.4
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.5e-107 394.8 765 46.8
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 3.3e-107 393.7 764 46.9
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.2e-106 391.7 681 39.1
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.2e-106 391.7 606 39.9
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.0e-105 388.7 656 40.2
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.4e-105 388.3 731 46.4
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.4e-104 383.6 691 48.2
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 5.7e-104 382.9 719 46.0
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 9.8e-104 382.1 523 44.4
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.7e-103 381.3 644 49.8
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 4.1e-102 376.7 651 51.9
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.4e-102 376.3 640 38.6
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 4.6e-101 373.2 597 40.5
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 5.9e-101 372.9 624 50.0
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 6.6e-100 369.4 679 37.7
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.3e-99 366.7 754 43.8
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 4.3e-99 366.7 736 44.7
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.1e-98 364.4 707 45.7
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.1e-98 364.4 526 42.4
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.1e-98 364.4 682 47.4
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 2.8e-98 364.0 728 44.9
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.2e-97 359.8 774 44.2
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.7e-95 354.8 727 45.0
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 8.3e-95 352.4 695 44.0
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.4e-94 351.7 720 46.1
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 3.2e-94 350.5 685 46.9
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 4.1e-94 350.1 728 45.7
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 3.5e-93 347.1 689 44.8
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.6e-90 337.0 763 43.8
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 3.7e-87 327.0 640 46.7
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 1.4e-86 325.1 679 45.8
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 5.1e-84 316.6 469 41.2
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.6e-82 310.5 543 50.1
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 6.4e-79 299.7 608 45.1
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 3.0e-76 290.8 455 41.8
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 8.9e-73 279.3 540 49.3
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.2e-72 278.9 566 48.4
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.2e-70 270.4 218 60.6
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 4.6e-69 266.9 266 59.0
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 6.0e-69 266.5 592 35.5
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 5.1e-68 263.5 575 33.4
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.2e-64 252.3 229 63.8
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.1e-59 235.7 572 42.7
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 4.9e-55 220.3 613 32.5
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.0e-52 211.1 441 53.3
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.8e-47 194.1 323 42.1
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-43 182.6 176 52.3
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 3.3e-43 181.0 474 30.0
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 2.2e-31 141.7 441 28.3
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 1.9e-30 138.7 648 26.5
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.2e-29 136.0 440 44.8
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.5e-24 119.0 414 44.7
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.2e-15 88.6 204 38.7
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 5.0e-15 87.4 82 61.0
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 7.2e-14 83.6 155 41.3
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.2e-13 82.8 47 83.0
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 4.7e-13 80.9 133 39.8
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.8e-12 79.0 66 68.2
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 7.5e-11 73.6 81 44.4
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 2.2e-10 72.0 75 50.7
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 8.2e-10 70.1 136 39.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.4e-09 68.6 133 36.8
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 3.1e-09 68.2 281 27.0


User provided reference genes

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