Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.5e-227 792.7 476 100.0
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 7.3e-145 518.1 490 69.8
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 1.5e-142 510.4 498 69.9
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 5.4e-140 501.9 446 69.1
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 1.2e-123 447.6 426 67.4
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 1.3e-122 444.1 430 70.5
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 2.3e-122 443.4 444 64.4
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.1e-122 442.2 429 62.9
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.1e-121 441.0 427 65.3
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 1.9e-121 440.3 429 66.4
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 2.5e-121 439.9 422 70.4
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.3e-121 439.5 421 67.7
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 4.3e-121 439.1 451 66.1
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 5.6e-121 438.7 416 68.3
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 3.6e-120 436.0 419 69.5
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 4.7e-120 435.6 451 65.9
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 4.7e-120 435.6 419 64.0
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 4.7e-120 435.6 422 67.8
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 4.7e-120 435.6 427 63.2
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 4.7e-120 435.6 502 60.0
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 6.2e-120 435.3 418 65.3
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.1e-119 434.5 422 67.8
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 1.1e-119 434.5 436 63.5
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 3.1e-119 433.0 427 67.9
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 6.9e-119 431.8 464 65.5
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 1.3e-117 427.6 411 70.8
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 6.4e-117 425.2 433 63.0
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 8.4e-117 424.9 425 59.8
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 8.4e-117 424.9 418 64.6
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.4e-116 424.1 429 62.5
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 4.2e-116 422.5 447 61.5
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 5.4e-116 422.2 426 62.7
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 7.1e-116 421.8 423 64.5
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 7.1e-116 421.8 424 68.2
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 9.3e-116 421.4 425 66.8
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 2.7e-115 419.9 427 67.2
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 2.7e-115 419.9 415 63.9
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 6.0e-115 418.7 419 67.5
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 6.0e-115 418.7 422 64.2
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 7.8e-115 418.3 421 63.9
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 1.0e-114 417.9 377 72.7
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 1.3e-114 417.5 429 65.5
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 1.7e-114 417.2 434 62.0
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.9e-114 416.0 423 65.7
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 6.6e-114 415.2 424 66.3
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 8.7e-114 414.8 377 70.8
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 1.5e-113 414.1 415 64.3
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 7.3e-113 411.8 426 63.6
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 2.1e-112 410.2 416 67.8
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 2.1e-112 410.2 427 63.5
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 2.8e-112 409.8 420 65.2
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 3.6e-112 409.5 420 67.4
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 1.1e-111 407.9 427 65.8
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.1e-111 407.9 422 62.8
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 1.1e-111 407.9 425 63.3
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 1.4e-111 407.5 427 65.8
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 1.4e-111 407.5 457 59.5
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.8e-111 407.1 422 63.0
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 5.3e-111 405.6 421 65.1
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.2e-110 404.4 419 67.1
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.2e-110 404.4 399 67.2
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.0e-110 403.7 417 66.9
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 7.6e-110 401.7 416 63.5
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 7.6e-110 401.7 419 65.9
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 9.9e-110 401.4 427 62.5
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 2.2e-109 400.2 434 65.7
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 2.2e-109 400.2 434 65.7
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.9e-109 399.8 419 65.9
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.9e-109 399.8 422 62.6
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 4.9e-109 399.1 436 61.7
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 1.1e-108 397.9 376 69.7
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 6.0e-107 392.1 421 67.0
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 5.1e-106 389.0 427 64.2
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.1e-105 387.9 424 64.4
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 3.3e-105 386.3 423 63.8
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-104 384.4 428 61.0
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 2.8e-104 383.3 427 61.1
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 3.7e-104 382.9 412 62.6
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 6.2e-104 382.1 416 65.6
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 1.3e-101 374.4 421 65.3
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.1e-100 371.3 422 60.0
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 5.5e-100 369.0 453 57.2
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 3.0e-98 363.2 612 45.4
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 3.9e-98 362.8 433 58.9
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.3e-96 357.8 424 56.8
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 1.1e-95 354.8 366 63.7
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.5e-93 345.5 409 61.6
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 2.1e-91 340.5 366 60.9
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 6.9e-87 325.5 429 55.0
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 6.9e-87 325.5 346 59.2
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 4.5e-86 322.8 370 63.0
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.3e-85 321.2 432 52.8
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.3e-85 321.2 432 52.8
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.7e-85 320.9 293 72.4
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.6e-83 313.2 407 52.6
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 1.6e-80 304.3 284 67.6
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.6e-80 304.3 276 65.2
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-77 294.7 283 61.5
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 1.7e-77 294.3 415 49.6
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 5.0e-77 292.7 463 54.0
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 1.9e-76 290.8 329 63.8
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 2.0e-73 280.8 295 61.7
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 4.1e-71 273.1 287 62.7
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.0e-69 268.5 274 67.2
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.2e-69 267.3 415 49.6
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 5.0e-69 266.2 411 46.2
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-65 254.6 196 73.0
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 2.0e-65 254.2 311 58.5
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 1.3e-61 241.5 317 58.7
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 3.0e-58 230.3 372 49.7
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 2.2e-56 224.2 333 58.9
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 1.6e-54 218.0 566 36.9
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 2.9e-53 213.8 354 55.4
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 2.5e-44 184.1 508 38.6
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 8.9e-42 175.6 174 70.7
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 5.9e-38 162.9 102 83.3
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 1.7e-32 144.8 357 32.2
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 2.9e-32 144.1 108 70.4
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 3.9e-29 133.7 87 79.3
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 5.0e-29 133.3 119 68.1
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 2.8e-27 127.5 231 56.7
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 2.8e-27 127.5 195 45.6
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 1.7e-24 118.2 96 89.6
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 7.0e-23 112.8 79 69.6
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 7.8e-22 109.4 60 85.0
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.1e-20 105.5 106 73.6
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 7.3e-20 102.8 93 81.7
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.7e-16 91.7 93 57.0
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.9e-16 90.9 71 63.4
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.0e-13 82.4 96 56.2
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 2.3e-13 81.3 115 44.3
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.0e-13 80.9 63 71.4
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 8.4e-08 62.8 47 68.1
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 4.1e-07 60.5 100 42.0
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.1e-07 60.5 87 46.0
Oeu062664.1 Olea europaea HOM05D005481 ORTHO05D006779 4.1e-07 60.5 120 48.3
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 5.4e-07 60.1 139 29.5
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 7.1e-07 59.7 39 76.9


User provided reference genes

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