Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.5e-82 309.7 176 100.0
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 1.5e-39 166.8 176 56.8
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.3e-30 137.1 101 67.3
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 1.3e-30 137.1 171 49.1
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 1.7e-30 136.7 175 48.6
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 2.9e-30 136.0 122 58.2
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.9e-29 133.3 95 70.5
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 3.2e-29 132.5 96 70.8
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 3.2e-29 132.5 96 68.8
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 3.2e-29 132.5 165 47.9
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 3.2e-29 132.5 95 69.5
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 4.1e-29 132.1 101 68.3
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 5.4e-29 131.7 99 65.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 7.1e-29 131.3 94 71.3
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 9.2e-29 131.0 96 67.7
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.2e-28 130.6 96 65.6
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.2e-28 130.6 101 67.3
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.6e-28 130.2 98 66.3
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 1.6e-28 130.2 165 53.9
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.1e-28 129.8 96 69.8
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 3.5e-28 129.0 99 66.7
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 7.8e-28 127.9 94 68.1
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 7.8e-28 127.9 96 67.7
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.0e-27 127.5 133 52.6
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.0e-27 127.5 182 45.6
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.0e-27 127.5 94 68.1
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.3e-27 127.1 99 62.6
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 1.3e-27 127.1 92 69.6
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.7e-27 126.7 96 63.5
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.7e-27 126.7 139 52.5
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.7e-27 126.7 94 67.0
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.7e-27 126.7 126 55.6
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.7e-27 126.7 88 69.3
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.3e-27 126.3 93 67.7
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 2.3e-27 126.3 139 52.5
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 2.3e-27 126.3 139 52.5
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 3.0e-27 125.9 97 67.0
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 3.9e-27 125.6 90 70.0
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 6.6e-27 124.8 93 67.7
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 6.6e-27 124.8 95 64.2
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 8.7e-27 124.4 96 63.5
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.1e-26 124.0 117 55.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 1.1e-26 124.0 144 50.0
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 1.1e-26 124.0 144 50.0
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.1e-26 124.0 178 46.6
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.1e-26 124.0 92 66.3
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.1e-26 124.0 159 53.5
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.5e-26 123.6 93 67.7
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.5e-26 123.6 93 64.5
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 1.5e-26 123.6 178 47.2
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 1.9e-26 123.2 134 53.0
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.9e-26 123.2 96 66.7
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 2.5e-26 122.9 93 63.4
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.5e-26 122.9 93 63.4
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.3e-26 122.1 93 63.4
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 4.3e-26 122.1 89 68.5
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 4.3e-26 122.1 178 43.8
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 7.3e-26 121.3 97 61.9
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 9.6e-26 120.9 110 59.1
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.2e-25 120.6 96 63.5
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.2e-25 120.6 90 67.8
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.6e-25 120.2 96 62.5
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 2.1e-25 119.8 161 50.3
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 2.8e-25 119.4 166 45.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.8e-25 119.4 93 65.6
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 2.8e-25 119.4 92 62.0
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 3.6e-25 119.0 96 61.5
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 3.6e-25 119.0 159 50.9
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 4.7e-25 118.6 97 61.9
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 4.7e-25 118.6 92 68.5
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 4.7e-25 118.6 96 60.4
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 1.1e-24 117.5 95 60.0
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.4e-24 116.3 84 70.2
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 6.9e-24 114.8 94 61.7
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 1.2e-23 114.0 92 59.8
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.0e-23 113.2 96 58.3
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 4.4e-23 112.1 79 70.9
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.2e-22 109.8 91 62.6
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 2.9e-22 109.4 96 53.1
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 3.8e-22 109.0 97 54.6
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 2.4e-21 106.3 93 61.3
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 2.5e-18 96.3 175 37.1
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.2e-15 87.4 91 46.2
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 7.6e-15 84.7 67 62.7
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 4.9e-14 82.0 91 47.3
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 1.6e-12 77.0 67 64.2
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 3.5e-12 75.9 92 44.6
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.6e-07 59.7 89 40.4
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 4.9e-06 55.5 52 53.8


User provided reference genes

Program Settings