Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00446 Erythranthe guttata HOM05D005212 ORTHO05D006353 9.4e-181 636.7 318 100.0
Solyc04g007850.3 Solanum lycopersicum HOM05D005212 ORTHO05D006353 7.6e-114 414.5 326 64.4
Sopen04g002980 Solanum pennellii HOM05D005212 ORTHO05D006353 1.3e-113 413.7 326 64.4
SGA_v2.0_scaffold39G15210 Striga asiatica HOM05D005212 ORTHO05D006353 3.8e-113 412.1 317 68.1
CAN.G458.6 Capsicum annuum HOM05D005212 ORTHO05D006353 1.1e-112 410.6 326 64.1
CiPaw.05G194300 Carya illinoinensis HOM05D005212 ORTHO05D006353 3.0e-110 402.5 325 63.7
CSS0012951 Camellia sinensis var. sinensis HOM05D005212 ORTHO05D006353 3.3e-109 399.1 325 60.9
SalBow2G0696 Salvia bowleyana HOM05D005212 ORTHO05D006353 4.3e-109 398.7 293 69.3
GSVIVG01023834001 Vitis vinifera HOM05D005212 ORTHO05D006353 1.2e-108 397.1 325 62.5
Nitab4.5_0009115g0010 Nicotiana tabacum HOM05D005212 ORTHO05D006353 1.6e-108 396.7 327 63.3
Oeu014050.1 Olea europaea HOM05D005212 ORTHO05D006353 1.4e-107 393.7 323 63.8
PGR102G0858 Punica granatum HOM05D005212 ORTHO05D006353 4.0e-107 392.1 323 62.2
Peaxi162Scf00723g00423 Petunia axillaris HOM05D005212 ORTHO05D006353 1.2e-106 390.6 335 59.1
Duzib268G0887 Durio zibethinus HOM05D005212 ORTHO05D006353 1.5e-106 390.2 324 61.1
PGSC0003DMG400029477 Solanum tuberosum HOM05D005212 ORTHO05D006353 2.6e-106 389.4 298 63.8
Gohir.D09G202000 Gossypium hirsutum HOM05D005212 ORTHO05D006353 1.3e-105 387.1 323 59.4
Potri.001G461100 Populus trichocarpa HOM05D005212 ORTHO05D006353 2.9e-105 386.0 326 60.4
HanXRQChr08g0212231 Helianthus annuus HOM05D005212 ORTHO05D006353 4.9e-105 385.2 324 61.4
Gorai.006G225800 Gossypium raimondii HOM05D005212 ORTHO05D006353 6.4e-105 384.8 323 59.1
Thecc.04G190200 Theobroma cacao HOM05D005212 ORTHO05D006353 6.4e-105 384.8 308 61.7
Gohir.D13G128200 Gossypium hirsutum HOM05D005212 ORTHO05D006353 8.4e-105 384.4 323 59.1
Gorai.013G143600 Gossypium raimondii HOM05D005212 ORTHO05D006353 1.1e-104 384.0 323 59.1
Prupe.8G002300 Prunus persica HOM05D005212 ORTHO05D006353 1.4e-104 383.6 330 59.7
Nn3g18288 Nelumbo nucifera HOM05D005212 ORTHO05D006353 7.1e-104 381.3 326 60.7
Ca_24783_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 3.5e-103 379.0 325 59.7
Manes.17G080300 Manihot esculenta HOM05D005212 ORTHO05D006353 4.6e-103 378.6 309 60.8
Prupe.1G329700 Prunus persica HOM05D005212 ORTHO05D006353 7.8e-103 377.9 325 59.1
Gohir.A13G124600 Gossypium hirsutum HOM05D005212 ORTHO05D006353 1.3e-102 377.1 323 58.5
Lalb_Chr07g0187701 Lupinus albus HOM05D005212 ORTHO05D006353 2.3e-102 376.3 325 58.8
Gohir.A09G208525 Gossypium hirsutum HOM05D005212 ORTHO05D006353 5.1e-102 375.2 326 58.3
Psat7g082520 Pisum sativum HOM05D005212 ORTHO05D006353 8.7e-102 374.4 325 58.5
TWI60G0083 Tripterygium wilfordii HOM05D005212 ORTHO05D006353 1.9e-101 373.2 325 57.8
HanXRQChr12g0363921 Helianthus annuus HOM05D005212 ORTHO05D006353 2.1e-100 369.8 326 57.7
TPR.G18569 Trifolium pratense HOM05D005212 ORTHO05D006353 2.8e-100 369.4 325 59.4
TPR.G5141 Trifolium pratense HOM05D005212 ORTHO05D006353 2.8e-100 369.4 325 58.5
Duzib151G1103 Durio zibethinus HOM05D005212 ORTHO05D006353 6.2e-100 368.2 324 58.0
Thhalv10001552m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.1e-99 367.5 322 59.6
MSTRG.13603 Avicennia marina HOM05D005212 ORTHO05D006353 2.4e-99 366.3 221 81.0
EL10Ac9g21945 Beta vulgaris HOM05D005212 ORTHO05D006353 4.0e-99 365.5 330 56.7
Atru.chr12.1198 Acer truncatum HOM05D005212 ORTHO05D006353 9.0e-99 364.4 329 56.8
Haze_10945 Corylus avellana HOM05D005212 ORTHO05D006353 1.5e-98 363.6 325 57.2
THA.LOC104816387 Tarenaya hassleriana HOM05D005212 ORTHO05D006353 1.5e-98 363.6 319 58.3
ECA233G1697 Erigeron canadensis HOM05D005212 ORTHO05D006353 2.0e-98 363.2 331 55.3
Rhsim09G0094100 Rhododendron simsii HOM05D005212 ORTHO05D006353 3.4e-98 362.5 325 57.5
Lj4g0012207 Lotus japonicus HOM05D005212 ORTHO05D006353 7.6e-98 361.3 325 57.8
GSVIVG01011709001 Vitis vinifera HOM05D005212 ORTHO05D006353 2.2e-97 359.8 339 57.2
Medtr3g088850 Medicago truncatula HOM05D005212 ORTHO05D006353 6.4e-97 358.2 326 58.0
QL03p033836 Quercus lobata HOM05D005212 ORTHO05D006353 6.4e-97 358.2 291 61.5
RcHm_v2.0_Chr4g0443611 Rosa chinensis HOM05D005212 ORTHO05D006353 2.4e-96 356.3 327 56.3
RcHm_v2.0_Chr3g0448371 Rosa chinensis HOM05D005212 ORTHO05D006353 4.2e-96 355.5 326 55.8
Sp4g26600 Schrenkiella parvula HOM05D005212 ORTHO05D006353 4.2e-96 355.5 320 57.8
Ciclev10017606m.g Citrus clementina HOM05D005212 ORTHO05D006353 7.1e-96 354.8 317 59.3
Ciclev10028815m.g Citrus clementina HOM05D005212 ORTHO05D006353 1.6e-95 353.6 324 58.3
Aqoxy7G01425 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 2.1e-95 353.2 312 59.6
FvH4_4g34100 Fragaria vesca HOM05D005212 ORTHO05D006353 1.3e-94 350.5 327 56.0
BolC4t28609H Brassica oleracea HOM05D000073 ORTHO05D006353 1.8e-94 350.1 313 55.3
CARHR139690 Cardamine hirsuta HOM05D005212 ORTHO05D006353 2.3e-94 349.7 319 55.8
BcaC02g07097 Brassica carinata HOM05D005212 ORTHO05D006353 3.0e-94 349.4 313 55.3
AL4G43530 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 6.7e-94 348.2 315 55.9
Hma1.2p1_0060F.1_g032750 Hydrangea macrophylla HOM05D005212 ORTHO05D006353 8.7e-94 347.8 325 57.2
DCAR_014725 Daucus carota HOM05D005212 ORTHO05D006353 1.5e-93 347.1 325 54.8
Medtr3g096970 Medicago truncatula HOM05D005212 ORTHO05D006353 1.5e-93 347.1 325 56.9
MD16G1023100 Malus domestica HOM05D005212 ORTHO05D006353 2.5e-93 346.3 283 60.8
AT2G44510 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 2.8e-92 342.8 317 55.2
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 4.8e-92 342.0 308 55.2
Sed0020748 Sechium edule HOM05D005212 ORTHO05D006353 4.8e-92 342.0 324 55.6
CANSAT01G1481 Cannabis sativa HOM05D005212 ORTHO05D006353 1.1e-91 340.9 323 54.2
Glyma.08G095400 Glycine max HOM05D005212 ORTHO05D006353 1.8e-91 340.1 322 55.0
Carub.0004s2707 Capsella rubella HOM05D005212 ORTHO05D006353 2.4e-91 339.7 322 55.3
Eucgr.H01942 Eucalyptus grandis HOM05D005212 ORTHO05D006353 3.1e-91 339.3 344 52.9
Lj3C867T4 Lonicera japonica HOM05D005212 ORTHO05D006353 9.0e-91 337.8 305 56.4
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 1.2e-90 337.4 301 55.5
Oeu063592.1 Olea europaea HOM05D005212 ORTHO05D006353 1.5e-90 337.0 275 64.0
BraA04t18796Z Brassica rapa HOM05D000073 ORTHO05D000033 2.0e-90 336.7 318 54.1
Phvul.005G028500 Phaseolus vulgaris HOM05D005212 ORTHO05D006353 3.4e-90 335.9 315 55.6
Aa31LG1G21440 Aethionema arabicum HOM05D005212 ORTHO05D006353 2.2e-89 333.2 320 55.0
BcaB06g29383 Brassica carinata HOM05D005212 ORTHO05D006353 2.2e-89 333.2 310 54.8
Lsat_1_v5_gn_4_8681 Lactuca sativa HOM05D005212 ORTHO05D006353 3.8e-89 332.4 308 56.2
vmacro10659 Vaccinium macrocarpon HOM05D005212 ORTHO05D006353 4.9e-89 332.0 303 57.1
Sabra16G0312600 Salix brachista HOM05D005212 ORTHO05D006353 2.4e-88 329.7 361 51.0
Ca_01441_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 3.2e-88 329.3 294 58.5
Ah.11g044490 Amaranthus hybridus HOM05D005212 ORTHO05D006353 9.3e-88 327.8 330 53.6
Dinv36246 Davidia involucrata HOM05D005212 ORTHO05D006353 2.5e-85 319.7 294 57.5
Manes.15G130900 Manihot esculenta HOM05D005212 ORTHO05D006353 2.1e-84 316.6 293 56.0
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 1.1e-83 314.3 310 54.2
FAN07G0183 Fragaria x ananassa HOM05D005212 ORTHO05D006353 7.6e-82 308.1 301 54.2
AUR62008760 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.9e-80 303.5 337 49.0
HPP92_020815 Vanilla planifolia HOM05D005212 ORTHO05D006353 2.5e-80 303.1 329 48.9
Sc10g0005560 Simmondsia chinensis HOM05D005212 ORTHO05D006353 4.2e-80 302.4 298 53.7
PSO478G2757 Papaver somniferum HOM05D005212 ORTHO05D006353 4.6e-79 298.9 334 48.5
Dinv28041 Davidia involucrata HOM05D005212 ORTHO05D006353 3.0e-78 296.2 249 62.7
PSO339G5759 Papaver somniferum HOM05D005212 ORTHO05D006353 8.7e-78 294.7 334 49.4
PSO017G4317 Papaver somniferum HOM05D005212 ORTHO05D006353 1.5e-77 293.9 334 47.9
Sed0012238 Sechium edule HOM05D005212 ORTHO05D006353 5.7e-77 292.0 233 60.1
Os03g0853900 Oryza sativa ssp. japonica HOM05D005212 ORTHO05D006353 3.7e-76 289.3 269 52.8
ClCG01G006340 Citrullus lanatus HOM05D005212 ORTHO05D006353 1.4e-75 287.3 338 48.8
ATR0829G227 Amborella trichopoda HOM05D005212 ORTHO05D006353 2.6e-74 283.1 251 56.2
FAN12G1848 Fragaria x ananassa HOM05D005212 ORTHO05D006353 7.7e-74 281.6 294 52.7
FAN17G0532 Fragaria x ananassa HOM05D005212 ORTHO05D006353 7.7e-74 281.6 303 50.5
FAN22G0397 Fragaria x ananassa HOM05D005212 ORTHO05D006353 1.7e-73 280.4 329 48.3
Zm00001eb210590 Zea mays HOM05D005212 ORTHO05D006353 6.5e-73 278.5 368 43.8
BcaC01g05169 Brassica carinata HOM05D005212 ORTHO05D006353 3.3e-69 266.2 275 53.8
PSO384G3589 Papaver somniferum HOM05D005212 ORTHO05D006353 5.7e-69 265.4 347 45.8
MELO3C005296.2 Cucumis melo HOM05D005212 ORTHO05D006353 1.4e-67 260.8 310 47.1
VMungo1080G0912 Vigna mungo HOM05D005212 ORTHO05D006353 1.8e-67 260.4 314 47.1
Cc04_g08850 Coffea canephora HOM05D005212 ORTHO05D006353 2.9e-65 253.1 172 69.8
Hund05206 Selenicereus undatus HOM05D005212 ORTHO05D006353 3.8e-65 252.7 273 50.2
AUR62025478 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.1e-64 251.1 215 56.7
Thhalv10014438m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 1.4e-64 250.8 242 56.2
Mapoly0006s0099 Marchantia polymorpha HOM05D005212 ORTHO05D006353 2.1e-63 246.9 267 46.1
Ca_09937_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 5.7e-61 238.8 237 53.6
Ca_09949_v3 Cicer arietinum L. HOM05D005212 ORTHO05D006353 5.7e-61 238.8 237 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3756 Anthoceros agrestis HOM05D005212 ORTHO05D006353 1.4e-59 234.2 274 44.2
BcaNung07052 Brassica carinata HOM05D005212 ORTHO05D006353 9.1e-59 231.5 310 42.9
AUR62014219 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.6e-58 229.9 294 43.9
SMO334G0102 Selaginella moellendorffii HOM05D005212 ORTHO05D006353 1.7e-57 227.3 243 46.1
BolC3t15307H Brassica oleracea HOM05D005212 ORTHO05D006353 2.2e-57 226.9 209 57.9
CiPaw.06G048200 Carya illinoinensis HOM05D005212 ORTHO05D006353 7.2e-56 221.9 324 43.2
Pp3c25_10280 Physcomitrium patens HOM05D005212 ORTHO05D006353 4.7e-55 219.2 287 39.4
AUR62014218 Chenopodium quinoa HOM05D005212 ORTHO05D006353 2.6e-50 203.4 245 45.7
C03p29590 Brassica napus HOM05D005212 ORTHO05D006353 4.5e-50 202.6 214 53.3
BcaB01g03308 Brassica carinata HOM05D005212 ORTHO05D006353 1.0e-49 201.4 237 47.3
AT5G03830 Arabidopsis thaliana HOM05D005212 ORTHO05D006353 2.9e-49 199.9 235 46.4
unitig_22.g5595 Utricularia gibba HOM05D005212 ORTHO05D006353 1.5e-48 197.6 182 56.6
Cpa.g.sc1084.4 Carica papaya HOM05D005212 ORTHO05D006353 4.0e-46 189.5 121 69.4
CDE04G0882 Ceratophyllum demersum HOM05D005212 ORTHO05D006353 1.3e-44 184.5 155 57.4
COL.COLO4_35970 Corchorus olitorius HOM05D005212 ORTHO05D006353 8.3e-44 181.8 177 50.8
AL6G13400 Arabidopsis lyrata HOM05D005212 ORTHO05D006353 4.5e-42 176.0 160 55.6
AUR62018080 Chenopodium quinoa HOM05D005212 ORTHO05D006353 7.7e-42 175.3 268 38.8
Hund24107 Selenicereus undatus HOM05D005212 ORTHO05D006353 1.1e-40 171.4 132 63.6
MCO05G230 Micromonas commoda HOM05D005212 ORTHO05D006353 1.5e-37 161.0 247 36.8
Cc04_g08860 Coffea canephora HOM05D005212 ORTHO05D006353 4.8e-36 156.0 157 57.3
Cre03.g200991 Chlamydomonas reinhardtii HOM05D005212 ORTHO05D006353 5.0e-33 146.0 282 30.9
Thhalv10015472m.g Eutrema salsugineum HOM05D005212 ORTHO05D006353 5.5e-32 142.5 146 52.7
CBR_g30204 Chara braunii HOM05D000019 ORTHO05D000353 9.5e-32 141.7 148 46.6
SEGI_04595 Sequoiadendron giganteum HOM05D005212 ORTHO05D006353 4.0e-30 136.3 160 45.6
unitig_22.g5596 Utricularia gibba HOM05D005212 ORTHO05D006353 3.4e-29 133.3 87 72.4
AUR62014216 Chenopodium quinoa HOM05D005212 ORTHO05D006353 1.8e-27 127.5 193 38.9
Sabra11G0142300 Salix brachista HOM05D005212 ORTHO05D006353 1.6e-26 124.4 159 45.3
Peaxi162Scf00376g00010 Petunia axillaris HOM05D005212 ORTHO05D006353 1.6e-18 97.8 175 34.9
Cfa023609 Carpinus fangiana HOM05D005212 ORTHO05D006353 3.5e-18 96.7 188 29.3
Aqoxy6G02632 Aquilegia oxysepala HOM05D005212 ORTHO05D006353 3.6e-15 86.7 68 66.2
ATR0594G067 Amborella trichopoda HOM05D005212 ORTHO05D006353 1.1e-11 75.1 98 38.8
PRCOL_00004527 Prasinoderma coloniale HOM05D005212 ORTHO05D006353 4.7e-07 59.7 202 25.7
Peaxi162Scf00376g00009 Petunia axillaris HOM05D005212 ORTHO05D006353 6.2e-07 59.3 33 81.8
Ca_15863_v3 Cicer arietinum L. HOM05D000681 ORTHO05D011778 5.2e-06 56.2 57 45.6


User provided reference genes

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