Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.1e-236 822.0 420 100.0
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 6.3e-201 704.1 418 85.6
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 9.8e-186 653.7 418 77.3
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 8.3e-185 650.6 418 77.0
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.5e-181 639.0 418 76.8
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 6.1e-180 634.4 416 73.8
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.0e-179 633.6 415 74.5
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 6.8e-179 630.9 424 77.4
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 4.4e-178 628.2 415 74.0
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 4.4e-178 628.2 415 73.7
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 8.3e-177 624.0 424 73.8
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 7.8e-175 617.5 462 69.5
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.0e-174 614.8 408 74.8
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.6e-172 609.8 418 72.5
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.6e-172 609.8 408 73.8
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.8e-171 606.3 420 73.6
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 6.8e-171 604.4 418 71.5
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 2.0e-170 602.8 419 73.5
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.2e-169 599.4 426 70.0
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.2e-169 599.4 440 70.7
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 3.7e-169 598.6 427 71.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.4e-168 596.7 413 72.2
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.1e-168 595.1 418 70.6
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 5.4e-168 594.7 418 70.6
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 7.0e-168 594.3 417 71.9
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.0e-167 592.8 418 70.6
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.7e-167 592.4 415 72.0
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.3e-166 590.1 415 71.1
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 8.6e-166 587.4 414 71.0
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.5e-165 586.6 415 71.1
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 3.3e-165 585.5 418 71.1
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 4.3e-165 585.1 411 73.5
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 7.3e-165 584.3 414 71.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.6e-164 582.0 414 70.8
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 4.7e-164 581.6 412 70.9
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.8e-163 579.7 414 70.0
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 6.8e-163 577.8 414 70.3
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.4e-162 575.5 461 65.3
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 5.8e-162 574.7 418 68.2
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.7e-161 573.2 408 70.8
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.7e-161 572.0 421 68.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 3.7e-161 572.0 411 70.3
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 1.1e-160 570.5 418 68.2
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.1e-160 568.5 461 64.4
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 7.1e-160 567.8 418 67.9
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 7.1e-160 567.8 416 67.1
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 9.2e-160 567.4 418 68.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 2.7e-159 565.8 412 69.7
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 2.7e-159 565.8 411 69.1
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 4.6e-159 565.1 420 69.5
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.3e-158 563.5 414 68.4
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 2.3e-158 562.8 422 65.9
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 5.1e-158 561.6 455 64.2
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 5.1e-158 561.6 413 68.0
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 6.6e-158 561.2 409 68.5
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.5e-157 560.1 416 66.3
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.3e-157 558.9 484 61.8
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 4.3e-157 558.5 409 69.2
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.3e-157 558.5 416 65.6
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.2e-156 557.0 416 66.3
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.6e-156 556.6 416 65.1
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.8e-156 555.8 416 67.3
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 4.7e-156 555.1 413 68.0
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 4.0e-155 552.0 402 68.2
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 6.8e-155 551.2 420 67.6
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.8e-155 551.2 405 68.4
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 2.9e-153 545.8 417 65.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 4.9e-153 545.0 418 67.2
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 8.4e-153 544.3 445 62.0
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 1.4e-152 543.5 413 64.9
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.9e-152 543.1 416 66.1
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 5.4e-152 541.6 424 65.6
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 7.1e-152 541.2 445 61.3
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 2.7e-151 539.3 445 61.1
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 7.8e-151 537.7 416 64.7
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 1.7e-150 536.6 418 66.5
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 2.8e-148 529.3 405 66.7
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 4.4e-146 521.9 402 66.4
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.8e-146 521.5 448 61.8
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 2.2e-145 519.6 457 57.8
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 4.9e-145 518.5 402 65.9
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.1e-144 514.6 442 62.0
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 4.6e-143 511.9 346 75.4
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 4.6e-143 511.9 402 64.9
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 7.8e-143 511.1 411 66.2
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.7e-142 510.0 412 60.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 7.3e-141 504.6 382 68.1
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 4.8e-140 501.9 446 59.9
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 5.3e-139 498.4 443 58.5
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 6.9e-139 498.0 423 59.1
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 7.6e-138 494.6 333 74.5
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 7.1e-136 488.0 418 60.5
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.3e-134 483.8 360 67.8
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.1e-134 481.9 414 61.4
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 1.5e-130 470.3 339 68.7
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.6e-122 443.0 409 57.9
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 7.6e-122 441.4 308 73.4
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 5.7e-117 425.2 285 74.7
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 1.4e-115 420.6 313 70.6
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.0e-110 404.4 419 54.4
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 9.7e-109 397.9 263 78.3
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.7e-100 370.5 383 50.9
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.4e-99 367.5 283 65.4
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 2.4e-99 366.7 264 69.7
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 6.5e-97 358.6 389 50.1
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 2.7e-95 353.2 382 50.8
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.7e-93 345.5 215 80.0
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 3.7e-92 342.8 217 78.8
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.5e-88 330.1 238 69.3
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 5.5e-88 328.9 319 54.2
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 5.9e-82 308.9 242 63.2
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 8.8e-78 295.0 315 51.1
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.2e-76 290.4 361 49.3
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 6.3e-76 288.9 293 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.8e-68 263.5 346 45.4
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.9e-64 250.8 225 57.8
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 1.2e-55 221.5 166 69.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.2e-55 221.5 402 36.8
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.6e-55 221.1 142 73.2
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 6.8e-54 215.7 137 75.9
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 6.6e-49 199.1 125 76.8
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.6e-47 194.5 153 62.1
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.6e-47 194.5 179 56.4
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 2.1e-42 177.6 404 33.4
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.3e-40 170.2 306 37.3
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.3e-33 148.3 157 52.9
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.7e-33 147.9 108 69.4
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.3e-32 143.7 101 67.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 3.4e-29 133.7 87 74.7
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 7.3e-24 115.9 365 28.2
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 6.9e-22 109.4 101 55.4
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 8.4e-20 102.4 218 32.1
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.2e-18 98.6 101 52.5
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.1e-18 97.8 117 51.3
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 5.1e-17 93.2 79 59.5
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.7e-15 87.0 65 61.5
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 6.2e-15 86.3 79 58.2


User provided reference genes

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