Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 2.1e-158 563.5 656 100.0
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 9.6e-71 272.3 226 63.7
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 3.3e-55 220.7 224 50.9
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 1.1e-42 179.1 168 54.8
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 7.2e-42 176.4 290 36.9
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 4.6e-41 173.7 227 41.0
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 9.7e-39 166.0 204 39.7
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 2.2e-38 164.9 225 42.2
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 2.2e-38 164.9 185 47.0
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 4.8e-38 163.7 143 51.0
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 6.9e-37 159.8 143 49.7
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 1.2e-36 159.1 243 39.1
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 2.6e-36 157.9 286 33.2
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 3.4e-36 157.5 205 37.6
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 3.8e-35 154.1 205 39.5
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 5.0e-35 153.7 143 46.9
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 6.5e-35 153.3 225 40.0
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 1.4e-34 152.1 205 39.0
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 1.4e-34 152.1 143 46.9
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 1.9e-34 151.8 191 38.2
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 2.5e-34 151.4 193 40.4
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 3.2e-34 151.0 225 38.7
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 5.5e-34 150.2 205 38.0
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 7.2e-34 149.8 143 46.9
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 2.7e-33 147.9 201 37.8
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 3.6e-33 147.5 258 36.0
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 3.9e-32 144.1 286 32.9
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 6.7e-32 143.3 143 45.5
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 8.8e-32 142.9 143 44.8
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 2.8e-30 137.9 224 37.1
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 6.3e-30 136.7 232 35.3
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 6.3e-30 136.7 143 44.8
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 1.4e-29 135.6 143 46.2
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 1.8e-29 135.2 143 44.1
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 6.9e-29 133.3 156 40.4
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 6.9e-29 133.3 143 46.2
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 1.2e-28 132.5 144 44.4
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 2.0e-28 131.7 143 42.0
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 2.6e-28 131.3 189 36.5
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 2.6e-28 131.3 210 35.2
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 7.7e-28 129.8 207 33.8
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 2.2e-27 128.3 159 39.6
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 2.9e-27 127.9 154 41.6
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 6.1e-25 120.2 211 32.7
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 7.9e-25 119.8 116 47.4
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 1.0e-24 119.4 172 36.0
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 5.1e-24 117.1 155 40.6
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.5e-23 115.5 198 32.3
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 7.4e-23 113.2 134 40.3
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 9.7e-23 112.8 214 31.3
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 9.7e-23 112.8 150 37.3
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 1.7e-22 112.1 185 36.2
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 2.2e-22 111.7 165 35.2
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 2.2e-22 111.7 165 35.2
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 2.2e-22 111.7 165 35.2
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 2.2e-22 111.7 175 33.1
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 2.2e-22 111.7 180 35.0
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 2.8e-22 111.3 177 33.9
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 2.8e-22 111.3 119 45.4
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 3.7e-22 110.9 134 39.6
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 3.7e-22 110.9 227 31.3
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 3.7e-22 110.9 176 32.4
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 4.8e-22 110.5 185 34.1
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 6.3e-22 110.2 180 34.4
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 1.4e-21 109.0 160 34.4
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 1.8e-21 108.6 122 44.3
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 5.3e-21 107.1 178 33.1
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 1.2e-20 105.9 143 33.6
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 1.6e-20 105.5 201 29.4
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 2.0e-20 105.1 143 36.4
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 7.7e-20 103.2 137 37.2
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 1.0e-19 102.8 186 32.3
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 1.7e-19 102.1 137 37.2
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 2.9e-19 101.3 124 41.9
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 3.8e-19 100.9 128 37.5
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 6.5e-19 100.1 288 25.7
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 4.2e-18 97.4 137 35.8
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 1.2e-17 95.9 124 39.5
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 2.7e-17 94.7 204 28.4
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 3.6e-17 94.4 122 38.5
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 3.3e-15 87.8 181 29.3
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 2.8e-14 84.7 144 32.6
Oeu048390.1 Olea europaea HOM05D000798 ORTHO05D000659 5.3e-13 80.5 170 31.8
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 2.7e-12 78.2 123 37.4
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 2.7e-12 78.2 61 57.4
FAN12G1126 Fragaria x ananassa HOM05D007426 ORTHO05D009167 5.0e-11 73.9 62 58.1
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 2.3e-08 65.1 122 36.9
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 4.4e-07 60.8 105 35.2
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 5.7e-07 60.5 139 28.1
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 2.2e-06 58.5 139 28.8


User provided reference genes

Program Settings