Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 4.2e-75 284.6 148 100.0
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.0e-49 200.3 129 82.2
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 2.1e-42 176.0 129 69.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 6.1e-42 174.5 129 65.9
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 1.8e-41 172.9 128 69.5
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.0e-41 172.2 131 69.5
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 2.0e-40 169.5 129 68.2
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 3.4e-40 168.7 126 68.3
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 4.4e-40 168.3 129 69.8
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 5.7e-40 167.9 129 69.8
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 8.3e-39 164.1 128 64.1
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.4e-38 163.3 126 65.9
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-38 163.3 126 67.5
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 2.4e-38 162.5 129 63.6
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 3.1e-38 162.2 126 66.7
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 4.1e-38 161.8 129 65.9
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 5.4e-38 161.4 129 63.6
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 5.4e-38 161.4 135 62.2
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 5.4e-38 161.4 128 65.6
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 9.2e-38 160.6 129 63.6
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 2.7e-37 159.1 128 60.9
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 5.9e-37 157.9 147 60.5
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 5.9e-37 157.9 128 64.1
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.3e-36 156.8 137 61.3
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 3.8e-36 155.2 135 58.5
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 3.8e-36 155.2 126 62.7
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 3.8e-36 155.2 127 62.2
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.8e-36 155.2 132 65.2
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.1e-35 153.7 130 61.5
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 2.5e-35 152.5 141 55.3
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 4.3e-35 151.8 132 61.4
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.6e-35 151.4 132 60.6
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 7.3e-35 151.0 129 58.9
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.2e-34 150.2 137 54.7
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.6e-34 149.8 135 60.0
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.6e-34 149.8 135 60.0
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.6e-34 149.8 135 60.0
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.1e-34 149.4 132 61.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 8.0e-34 147.5 134 60.4
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.0e-33 147.1 129 62.0
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.3e-33 146.0 129 57.4
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 3.0e-33 145.6 126 61.1
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.0e-33 145.2 129 61.2
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 5.2e-33 144.8 128 57.8
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 8.9e-33 144.1 127 57.5
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.5e-32 143.3 129 58.1
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 5.8e-32 141.4 145 52.4
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.3e-31 140.2 136 55.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.7e-31 139.8 126 51.6
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.2e-31 139.4 143 54.5
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 2.2e-31 139.4 143 54.5
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.9e-31 139.0 129 56.6
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.7e-31 138.7 128 59.4
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 3.7e-31 138.7 129 56.6
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 4.9e-31 138.3 129 56.6
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 6.4e-31 137.9 136 56.6
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 6.4e-31 137.9 126 56.3
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 8.3e-31 137.5 135 53.3
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 1.9e-30 136.3 130 54.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.9e-30 136.3 136 55.9
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 7.0e-30 134.4 139 48.9
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 7.0e-30 134.4 143 52.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.2e-29 133.7 129 51.2
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.2e-29 133.7 129 55.8
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 1.6e-29 133.3 127 53.5
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 3.5e-29 132.1 127 50.4
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 4.6e-29 131.7 135 48.9
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 4.6e-29 131.7 126 55.6
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 7.8e-29 131.0 126 54.0
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.8e-29 131.0 129 52.7
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.0e-28 130.6 134 53.7
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.0e-28 130.6 134 53.7
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 1.7e-28 129.8 128 54.7
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 1.7e-28 129.8 124 54.8
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.3e-28 129.4 129 51.9
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.0e-28 129.0 129 48.1
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.0e-28 129.0 140 47.1
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.1e-27 127.1 129 49.6
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 1.5e-27 126.7 129 48.8
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.9e-27 126.3 134 49.3
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 3.3e-27 125.6 126 47.6
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 3.3e-27 125.6 122 52.5
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 5.6e-27 124.8 136 47.8
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 5.6e-27 124.8 122 50.0
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 9.5e-27 124.0 129 50.4
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 9.5e-27 124.0 143 48.3
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.2e-26 123.6 131 51.1
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.6e-26 123.2 131 51.1
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 3.6e-26 122.1 129 48.8
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.6e-26 122.1 139 48.2
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 8.0e-26 120.9 118 50.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.1e-25 120.6 142 45.8
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.1e-25 120.6 130 50.8
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.4e-25 120.2 132 51.5
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.3e-25 119.4 141 48.2
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.0e-25 118.6 129 48.1
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.0e-25 118.6 129 48.1
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 9.8e-24 114.0 141 46.8
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.4e-22 110.2 129 51.2
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.4e-22 110.2 131 44.3
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 9.2e-22 107.5 131 47.3
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.6e-21 106.7 129 45.0
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 2.1e-21 106.3 131 47.3
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 2.7e-21 105.9 127 52.0
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.1e-17 94.0 134 43.3
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 1.1e-17 94.0 123 36.6
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.1e-14 84.0 53 71.7
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 1.2e-13 80.5 135 37.8
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.7e-13 79.3 139 34.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.3e-12 77.0 80 55.0
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 5.1e-12 75.1 126 35.7
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 1.2e-08 63.9 50 60.0
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 1.9e-06 56.6 74 36.5
CARHR269230 Cardamine hirsuta HOM05D000984 ORTHO05D001096 7.1e-06 54.7 81 30.9
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 7.1e-06 54.7 92 43.5


User provided reference genes

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