Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 8.2e-241 836.6 423 100.0
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.7e-166 589.7 425 72.9
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.8e-163 579.7 432 71.5
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 5.4e-160 568.2 425 70.6
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.4e-155 553.5 430 67.0
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.4e-155 552.7 430 66.7
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 6.9e-155 551.2 424 67.7
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 6.9e-155 551.2 424 67.7
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 2.6e-154 549.3 424 67.2
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.3e-153 547.0 428 68.0
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 3.8e-153 545.4 431 66.6
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 6.4e-153 544.7 430 67.0
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.1e-152 543.9 425 66.8
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 1.4e-152 543.5 430 66.5
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.9e-152 543.1 424 66.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 3.2e-152 542.3 430 65.1
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.6e-151 540.0 429 65.5
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.6e-151 540.0 429 65.5
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 2.1e-151 539.7 428 66.4
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 6.0e-151 538.1 429 66.0
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 1.8e-150 536.6 426 65.3
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 3.0e-150 535.8 424 65.6
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 6.7e-150 534.6 428 65.9
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 2.5e-149 532.7 430 65.3
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 5.6e-149 531.6 422 65.9
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 9.6e-149 530.8 425 66.8
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 1.3e-148 530.4 446 63.0
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 1.6e-148 530.0 427 64.6
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.6e-148 530.0 426 64.8
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 2.8e-148 529.3 429 63.4
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 2.8e-148 529.3 431 63.6
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 6.2e-148 528.1 427 64.9
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 1.1e-147 527.3 431 64.5
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 1.4e-147 526.9 430 64.0
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 4.0e-147 525.4 430 64.7
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 5.3e-147 525.0 426 64.8
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 6.9e-147 524.6 426 65.0
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 9.0e-147 524.2 429 64.6
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.0e-146 523.1 424 63.7
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 2.0e-146 523.1 427 65.3
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 2.6e-146 522.7 427 64.4
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.3e-145 520.4 426 64.6
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.7e-145 520.0 426 63.6
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 2.9e-145 519.2 427 64.2
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 1.4e-144 516.9 424 64.4
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 1.4e-144 516.9 430 63.0
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.9e-144 516.5 424 63.9
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 3.2e-144 515.8 428 62.6
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 4.2e-144 515.4 432 62.7
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 5.5e-144 515.0 426 63.1
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 7.1e-144 514.6 430 62.6
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 9.3e-144 514.2 429 62.5
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.2e-143 513.8 427 63.5
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 2.1e-143 513.1 424 61.3
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 2.7e-143 512.7 426 62.2
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 6.0e-143 511.5 430 62.6
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 1.0e-142 510.8 426 62.0
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.0e-142 510.8 424 61.1
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.3e-142 510.4 426 62.4
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 3.9e-142 508.8 426 62.7
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 2.2e-140 503.1 428 59.8
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.2e-140 503.1 428 61.7
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 4.8e-140 501.9 422 61.1
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 4.8e-140 501.9 422 61.1
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 1.8e-139 500.0 422 60.9
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 4.1e-139 498.8 426 61.0
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 4.1e-139 498.8 421 61.8
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.0e-138 496.5 422 59.5
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 2.0e-138 496.5 429 61.3
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 3.4e-138 495.7 424 62.7
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 5.9e-138 495.0 425 60.7
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 1.0e-137 494.2 426 59.6
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 6.5e-137 491.5 426 61.0
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 3.2e-136 489.2 426 59.2
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 3.2e-136 489.2 431 59.2
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 3.2e-136 489.2 556 51.3
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 5.5e-136 488.4 424 58.7
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-135 487.3 426 59.4
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 6.1e-135 485.0 427 59.5
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 8.8e-134 481.1 422 57.6
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 2.5e-133 479.6 425 62.6
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 9.7e-133 477.6 398 62.6
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 1.4e-131 473.8 384 67.7
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 3.1e-131 472.6 429 59.9
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 1.2e-130 470.7 431 58.9
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 1.5e-130 470.3 424 58.5
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 2.5e-128 463.0 393 62.8
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 5.5e-128 461.8 429 57.1
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-127 460.7 432 55.8
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.3e-126 456.4 424 57.3
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 5.7e-125 451.8 425 58.1
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 8.2e-124 448.0 426 55.6
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 8.2e-124 448.0 426 58.5
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.4e-123 446.4 426 54.0
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 5.9e-122 441.8 426 55.2
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 1.0e-118 431.0 356 64.0
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.0e-118 429.5 398 59.0
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 4.8e-116 422.2 354 64.1
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 4.0e-110 402.5 364 60.2
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 7.0e-107 391.7 268 72.4
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 6.5e-105 385.2 356 61.0
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.9e-104 383.6 262 71.8
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.9e-104 383.6 268 70.9
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.6e-103 380.6 428 47.9
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 8.8e-102 374.8 426 49.1
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.6e-101 373.2 284 67.3
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 6.1e-95 352.1 281 68.3
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.3e-94 350.1 426 45.8
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.3e-94 350.1 451 43.2
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.2e-93 347.8 261 65.9
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.5e-93 347.4 230 73.0
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 5.7e-93 345.5 228 74.1
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.4e-91 340.9 432 45.1
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 3.5e-82 309.7 312 55.1
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 2.2e-60 237.3 150 79.3
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 3.3e-56 223.4 283 47.7
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 1.7e-49 201.1 197 59.4
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 5.6e-48 196.1 442 30.8
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 1.4e-46 191.4 470 31.7
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 9.9e-45 185.3 474 32.1
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 2.4e-43 180.6 199 51.8
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 3.5e-42 176.8 103 85.4
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 7.6e-37 159.1 107 67.3
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 1.4e-22 111.7 169 37.9
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 3.2e-19 100.5 60 78.3
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 4.2e-19 100.1 92 58.7
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 6.1e-18 96.3 122 41.8
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 1.0e-17 95.5 64 73.4
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.8e-14 84.7 111 40.5
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 5.3e-14 83.2 121 39.7
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 6.9e-14 82.8 69 55.1
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-12 78.6 71 52.1
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 2.2e-12 77.8 127 41.7
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 6.1e-10 69.7 35 91.4
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.9e-09 67.0 91 38.5
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 5.7e-08 63.2 34 85.3
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-06 58.9 58 44.8


User provided reference genes

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