Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 9.0e-265 916.4 465 100.0
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 1.1e-182 643.7 468 71.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.2e-176 623.6 465 70.8
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.4e-171 605.5 454 69.4
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 4.4e-171 605.1 435 70.6
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 4.6e-168 595.1 463 67.0
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.3e-167 593.6 416 72.8
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 2.3e-167 592.8 402 73.4
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.3e-166 588.6 418 71.8
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 4.3e-166 588.6 423 70.4
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.3e-164 582.8 467 66.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 6.4e-162 574.7 444 65.1
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 6.4e-162 574.7 444 65.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.9e-161 573.2 431 67.3
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 7.1e-161 571.2 426 67.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.6e-160 568.5 454 66.5
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 4.0e-156 555.4 431 64.7
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 7.6e-155 551.2 402 70.4
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.2e-154 549.7 442 64.0
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 4.2e-153 545.4 429 66.9
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 7.1e-153 544.7 464 61.9
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.2e-152 543.9 467 61.2
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.6e-152 543.5 441 64.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.1e-152 543.1 458 61.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.3e-151 539.7 439 62.6
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.3e-151 539.7 439 62.9
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 3.9e-151 538.9 455 61.1
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.1e-150 537.3 434 63.4
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.9e-150 536.6 417 66.9
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.6e-149 533.5 451 61.9
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 3.6e-149 532.3 423 62.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 6.2e-149 531.6 469 60.8
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 8.1e-149 531.2 388 68.0
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 8.1e-149 531.2 404 66.1
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.1e-148 530.8 435 62.5
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 2.4e-148 529.6 375 70.7
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 4.0e-148 528.9 420 63.3
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 6.9e-148 528.1 471 59.7
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.7e-146 523.5 415 64.6
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.7e-146 523.5 401 64.6
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 4.9e-146 521.9 402 65.2
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 8.4e-146 521.2 404 65.6
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 1.4e-145 520.4 419 62.3
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.9e-145 520.0 461 60.1
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 5.4e-145 518.5 413 62.7
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.7e-144 516.2 466 59.7
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.0e-144 515.0 403 64.8
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.0e-143 514.2 446 59.9
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.0e-143 514.2 446 60.1
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.7e-143 513.5 440 57.0
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.3e-143 513.1 431 60.6
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 5.1e-143 511.9 436 60.8
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.1e-142 510.8 460 58.5
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.1e-142 510.8 443 59.4
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.5e-142 509.6 418 61.7
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.5e-142 509.6 428 61.4
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.3e-142 509.2 428 61.7
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 3.3e-142 509.2 412 63.3
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.3e-142 509.2 465 60.2
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 5.6e-142 508.4 418 61.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 5.6e-142 508.4 429 60.4
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.8e-141 506.1 475 57.5
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 6.2e-141 505.0 401 63.8
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 8.1e-141 504.6 377 69.0
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-140 504.2 439 60.4
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 3.1e-140 502.7 444 59.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 4.0e-140 502.3 442 58.4
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 6.9e-140 501.5 440 59.1
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 6.9e-140 501.5 404 62.4
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.2e-139 500.7 439 58.5
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 1.5e-139 500.4 446 58.1
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 5.8e-139 498.4 440 58.0
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 9.9e-139 497.7 403 62.8
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.3e-138 497.3 333 76.3
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.1e-137 494.2 444 58.8
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.0e-135 487.6 381 63.5
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.8e-133 479.6 403 60.3
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.4e-132 477.2 463 56.4
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.5e-131 473.8 406 60.8
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.9e-129 466.8 416 60.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.1e-126 457.6 361 64.0
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.3e-119 433.3 406 55.7
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 3.0e-119 433.0 355 57.7
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 5.1e-119 432.2 332 65.7
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.5e-115 420.6 333 66.4
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.6e-115 419.9 401 55.4
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.3e-111 406.8 380 57.6
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 4.3e-110 402.5 330 60.6
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.1e-108 396.0 409 53.1
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 3.4e-107 392.9 296 67.9
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.8e-101 373.2 408 49.8
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 4.1e-100 369.4 286 67.8
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 9.1e-100 368.2 407 48.9
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.5e-99 365.9 295 60.7
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 5.9e-99 365.5 296 61.8
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 2.9e-98 363.2 413 44.8
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 8.0e-96 355.1 435 45.3
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.4e-92 343.6 263 65.0
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.4e-92 343.6 263 64.6
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.5e-90 335.5 333 52.6
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 2.0e-86 323.9 408 44.4
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 3.4e-86 323.2 289 61.2
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 4.9e-53 213.0 257 45.9
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 9.2e-52 208.8 170 62.4
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.3e-49 199.1 151 66.9
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.1e-44 182.6 147 64.6
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.6e-43 181.4 165 55.2
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.4e-36 158.3 145 52.4
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.5e-33 148.3 153 51.0
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.9e-33 147.9 122 63.9
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.7e-29 134.8 96 65.6
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 7.1e-28 129.4 111 58.6
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.8e-26 124.8 124 58.1
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.2e-22 112.1 92 58.7
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.2e-22 112.1 98 63.3
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.2e-08 62.8 50 56.0
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 1.8e-07 61.6 47 66.0


User provided reference genes

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