Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 0.0e+00 1154.8 578 100.0
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 6.9e-291 1003.4 577 85.8
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 1.6e-255 885.9 591 76.5
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 1.4e-254 882.9 588 76.2
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 3.0e-254 881.7 538 81.0
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 3.0e-254 881.7 538 81.6
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 5.2e-254 880.9 543 80.8
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 9.8e-253 876.7 577 75.9
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 6.3e-252 874.0 590 75.4
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 3.1e-251 871.7 546 79.5
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 2.9e-249 865.1 543 78.6
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.5e-248 862.8 541 79.1
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 2.5e-248 862.1 588 74.0
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 3.3e-248 861.7 539 79.4
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 4.3e-248 861.3 592 73.6
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 7.3e-248 860.5 591 74.3
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.8e-247 858.6 542 77.3
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 3.6e-247 858.2 538 77.9
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 4.7e-247 857.8 591 74.1
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 8.0e-247 857.1 590 73.7
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 6.8e-246 854.0 562 76.3
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 8.9e-246 853.6 542 76.8
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.2e-245 853.2 589 74.2
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 3.4e-245 851.7 539 78.3
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 4.4e-245 851.3 584 73.3
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 4.4e-245 851.3 548 77.0
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 4.4e-245 851.3 626 71.1
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 5.7e-245 850.9 591 73.4
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.7e-244 849.4 579 74.3
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 8.3e-244 847.0 536 78.0
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 8.3e-244 847.0 562 74.7
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 8.3e-244 847.0 553 76.7
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 2.4e-243 845.5 539 78.3
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.4e-243 845.5 590 73.1
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 5.4e-243 844.3 585 73.2
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 7.0e-243 844.0 591 73.3
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.6e-242 842.8 556 75.9
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.7e-242 842.0 583 74.3
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 2.7e-242 842.0 536 77.6
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 2.7e-242 842.0 593 71.3
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.3e-241 839.7 525 78.1
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 3.0e-241 838.6 592 72.1
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 8.6e-241 837.0 562 74.4
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 7.3e-240 833.9 566 74.4
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 3.6e-239 831.6 589 71.6
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 4.7e-239 831.2 574 73.3
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 2.3e-238 828.9 595 71.8
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 4.0e-238 828.2 593 70.7
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 5.2e-238 827.8 535 77.2
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 8.9e-238 827.0 586 71.0
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.5e-237 826.2 540 76.1
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 2.0e-237 825.9 593 71.3
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 2.0e-237 825.9 583 72.0
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 2.0e-237 825.9 540 76.3
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 5.8e-237 824.3 595 69.7
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 5.8e-237 824.3 562 73.8
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 9.8e-237 823.5 592 71.3
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 9.8e-237 823.5 592 70.3
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 1.3e-236 823.2 594 70.9
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 2.2e-236 822.4 594 70.0
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 2.9e-236 822.0 526 77.4
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 2.9e-236 822.0 552 74.8
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 4.9e-236 821.2 590 71.4
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 9.2e-235 817.0 538 74.2
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-234 816.6 552 74.5
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.6e-234 816.2 549 74.0
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 3.5e-234 815.1 594 69.5
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 1.0e-233 813.5 595 69.1
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.3e-233 813.1 594 69.0
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 1.5e-232 809.7 442 89.4
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 1.5e-232 809.7 610 69.8
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.9e-232 809.3 552 74.1
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 2.5e-232 808.9 542 73.8
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.5e-232 808.9 583 71.0
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.3e-232 808.5 551 74.0
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 2.8e-231 805.4 597 69.2
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 8.1e-231 803.9 597 69.2
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 2.3e-230 802.4 596 69.1
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 2.3e-230 802.4 596 69.1
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 1.9e-227 792.7 585 69.6
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 3.0e-225 785.4 535 73.8
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.2e-223 780.0 586 68.9
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.8e-223 778.9 521 75.8
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.9e-222 773.9 586 69.1
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 2.6e-221 772.3 518 73.9
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 9.9e-221 770.4 564 70.2
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.7e-220 769.6 520 73.3
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 3.8e-220 768.5 543 72.0
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 4.1e-219 765.0 578 69.0
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 5.1e-217 758.1 552 70.5
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 8.6e-217 757.3 579 69.8
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.9e-216 756.1 536 72.6
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 1.6e-215 753.1 580 67.4
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 7.6e-213 744.2 517 74.1
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.3e-212 743.4 463 77.5
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 1.7e-209 733.0 520 71.3
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 8.7e-209 730.7 491 73.9
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 1.5e-208 729.9 520 70.6
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 7.6e-205 717.6 465 77.4
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.3e-201 706.8 437 80.1
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.8e-198 696.4 500 71.6
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 4.0e-198 695.3 510 68.0
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.4e-197 692.2 493 70.8
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 8.4e-188 661.0 547 62.9
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 2.5e-187 659.4 589 61.1
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.5e-187 659.4 502 66.1
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 3.7e-183 645.6 434 73.5
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.8e-177 626.7 520 61.7
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 8.5e-164 581.3 447 64.4
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 1.7e-156 557.0 387 74.2
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 9.5e-123 444.9 324 66.4
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-95 354.8 253 70.8
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.9e-84 316.6 200 76.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-62 244.6 274 47.8
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-57 226.5 208 54.3
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 5.7e-51 206.5 141 71.6
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 4.8e-50 203.4 143 72.7
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 6.5e-39 166.4 100 76.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 1.8e-33 148.3 100 69.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 5.3e-33 146.7 101 69.3
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 4.8e-26 123.6 109 60.6
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.5e-24 117.5 177 42.4
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.1e-22 112.5 65 80.0
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 1.6e-21 108.6 74 68.9
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 5.7e-19 100.1 102 52.9
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.1e-17 95.9 65 69.2
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.1e-17 95.9 65 69.2
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 1.8e-17 95.1 68 70.6
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 2.0e-16 91.7 67 65.7
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 2.0e-16 91.7 67 65.7
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 5.6e-14 83.6 117 44.4
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 4.7e-13 80.5 54 66.7


User provided reference genes

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