Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.2e-111 405.6 199 100.0
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 2.5e-83 312.4 199 75.9
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.8e-82 308.9 199 73.4
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 2.8e-82 308.9 199 71.9
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 2.4e-81 305.8 195 74.4
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 8.4e-79 297.4 195 68.7
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.9e-78 296.2 190 71.1
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 3.2e-78 295.4 199 71.9
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 3.2e-78 295.4 193 69.4
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 7.1e-78 294.3 195 69.2
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.6e-77 293.1 195 68.7
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.7e-77 292.4 199 68.8
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 3.5e-77 292.0 195 69.2
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 3.5e-77 292.0 199 67.3
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 2.3e-76 289.3 195 67.7
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 2.3e-76 289.3 195 69.7
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 3.9e-76 288.5 199 68.8
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 5.1e-76 288.1 195 67.7
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 1.1e-75 287.0 194 68.6
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 1.9e-75 286.2 199 67.8
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 3.3e-75 285.4 199 65.8
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 4.3e-75 285.0 195 67.2
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.4e-75 284.3 195 67.7
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 7.4e-75 284.3 195 66.7
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 9.6e-75 283.9 198 66.7
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.3e-74 283.5 199 67.8
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 1.6e-74 283.1 195 66.2
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 2.1e-74 282.7 197 67.5
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 2.1e-74 282.7 199 67.8
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 2.8e-74 282.3 195 67.7
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 3.7e-74 282.0 199 66.8
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 4.8e-74 281.6 195 67.7
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 4.8e-74 281.6 199 67.3
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 4.8e-74 281.6 199 64.3
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 8.2e-74 280.8 199 65.3
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 1.1e-73 280.4 195 66.7
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.4e-73 280.0 199 67.8
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.8e-73 279.6 197 67.0
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 2.4e-73 279.3 199 62.8
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 3.1e-73 278.9 195 66.2
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 4.1e-73 278.5 199 65.8
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 5.3e-73 278.1 195 68.2
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 6.9e-73 277.7 199 67.3
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 6.9e-73 277.7 195 65.1
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 2.6e-72 275.8 199 65.8
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.4e-72 275.4 195 63.6
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 4.5e-72 275.0 195 66.2
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 5.9e-72 274.6 199 63.8
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 7.6e-72 274.2 195 66.7
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 7.6e-72 274.2 195 65.6
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 1.0e-71 273.9 199 65.8
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.2e-71 272.7 195 65.1
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 2.9e-71 272.3 183 68.3
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 3.8e-71 271.9 199 64.3
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.8e-71 271.9 195 65.1
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 3.8e-71 271.9 199 63.8
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 8.5e-71 270.8 199 63.3
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 8.5e-71 270.8 199 65.8
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.4e-70 270.0 195 61.5
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 1.4e-70 270.0 195 64.6
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.5e-70 269.2 199 63.3
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 2.5e-70 269.2 194 63.4
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.2e-70 268.9 199 63.3
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 4.2e-70 268.5 189 66.7
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.2e-70 268.5 183 67.2
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 5.5e-70 268.1 199 64.3
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.5e-70 268.1 199 65.3
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 5.5e-70 268.1 197 63.5
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 7.2e-70 267.7 199 63.8
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 7.2e-70 267.7 195 62.6
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 9.3e-70 267.3 199 64.3
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.6e-69 266.5 195 64.6
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.6e-69 266.5 199 62.3
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 2.1e-69 266.2 199 63.3
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 2.7e-69 265.8 199 63.3
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 6.1e-69 264.6 195 63.1
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 7.9e-69 264.2 186 66.7
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 1.3e-68 263.5 186 65.6
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.3e-68 262.7 194 62.4
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 2.3e-68 262.7 199 61.8
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.9e-68 261.9 191 65.4
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 5.1e-68 261.5 183 65.6
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 5.1e-68 261.5 199 63.8
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 6.7e-68 261.2 199 62.3
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 8.7e-68 260.8 195 62.6
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.5e-67 259.2 197 59.4
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 4.3e-67 258.5 199 62.8
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.3e-66 256.9 199 61.8
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 1.3e-66 256.9 199 63.3
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 1.6e-66 256.5 199 59.3
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 2.2e-66 256.1 195 62.1
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 2.8e-66 255.8 195 62.6
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 3.7e-66 255.4 199 61.8
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 4.8e-66 255.0 199 61.8
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 8.2e-66 254.2 184 63.6
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.4e-65 253.4 199 62.8
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 2.4e-65 252.7 199 61.8
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 2.4e-65 252.7 195 62.6
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.4e-65 252.7 184 63.6
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.4e-65 252.7 184 63.6
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 3.1e-65 252.3 199 61.3
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 3.1e-65 252.3 199 61.3
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 9.1e-65 250.8 197 61.4
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 9.1e-65 250.8 192 60.9
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 2.6e-64 249.2 186 64.5
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 2.6e-64 249.2 199 59.3
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 4.5e-64 248.4 189 63.0
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 4.5e-64 248.4 191 59.7
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 5.9e-64 248.1 192 62.5
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 5.9e-64 248.1 199 61.8
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.0e-63 247.3 195 59.0
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.4e-62 243.4 191 62.8
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 2.5e-62 242.7 179 65.4
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 2.1e-61 239.6 190 60.0
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 1.1e-59 233.8 183 61.7
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 4.4e-59 231.9 183 60.1
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 9.7e-59 230.7 184 58.7
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 3.7e-58 228.8 190 57.4
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 5.9e-56 221.5 170 61.8
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 1.2e-53 213.8 194 50.5
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.6e-53 212.2 143 67.1
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 6.1e-53 211.5 170 56.5
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.8e-52 209.9 144 68.1
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 6.7e-52 208.0 197 50.8
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 6.3e-50 201.4 195 53.8
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 1.1e-49 200.7 177 53.1
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 1.8e-49 199.9 156 62.8
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 2.4e-49 199.5 144 61.8
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 1.3e-47 193.7 144 56.2
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.8e-47 192.2 195 49.7
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 9.4e-46 187.6 180 48.9
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 2.1e-45 186.4 156 54.5
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 3.7e-42 175.6 114 67.5
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 2.9e-39 166.0 199 46.7
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 3.2e-38 162.5 98 72.4
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 4.0e-36 155.6 123 57.7
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.5e-35 153.7 177 44.6
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 4.1e-33 145.6 186 44.1
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 6.5e-31 138.3 183 43.7
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 5.7e-27 125.2 179 36.9
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 3.3e-22 109.4 73 65.8
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 2.1e-21 106.7 67 71.6
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.2e-19 100.9 106 49.1
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.0e-19 100.1 105 48.6
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 1.3e-18 97.4 118 43.2
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 4.9e-18 95.5 120 42.5
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.7e-15 87.0 187 34.2
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 3.3e-14 82.8 70 52.9
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 4.7e-13 79.0 64 48.4
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 8.0e-13 78.2 58 65.5
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 3.0e-07 59.7 41 61.0


User provided reference genes

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