Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.2e-109 399.8 199 100.0
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 6.0e-93 344.4 198 86.4
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 1.3e-92 343.2 194 86.6
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 9.6e-91 337.0 197 83.2
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 8.1e-90 334.0 197 82.7
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 8.1e-90 334.0 197 83.8
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.4e-89 332.4 197 82.7
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.5e-88 329.7 194 82.5
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 3.4e-88 328.6 197 81.2
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.3e-87 326.6 197 80.7
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.2e-87 325.9 191 83.8
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.8e-87 325.1 197 79.7
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.4e-86 323.2 197 80.2
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.9e-86 322.8 197 80.2
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.4e-86 322.4 194 81.4
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 3.2e-86 322.0 197 78.2
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 4.2e-86 321.6 197 79.2
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 5.5e-86 321.2 197 81.2
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 5.5e-86 321.2 197 79.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 7.1e-86 320.9 197 79.2
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 1.2e-85 320.1 197 79.2
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.2e-85 320.1 197 80.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 2.1e-85 319.3 198 78.8
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.5e-85 318.5 197 79.2
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 3.5e-85 318.5 197 78.2
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.5e-85 318.5 198 78.8
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 4.6e-85 318.2 197 77.7
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 4.6e-85 318.2 197 78.2
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 6.0e-85 317.8 197 78.2
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 6.0e-85 317.8 198 78.8
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.3e-84 316.6 194 79.9
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.3e-84 316.6 197 78.7
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.8e-84 316.2 197 78.7
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 1.8e-84 316.2 197 77.7
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.8e-84 316.2 197 77.7
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.8e-84 316.2 194 79.4
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.8e-84 316.2 194 80.4
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.8e-84 316.2 197 78.7
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 2.3e-84 315.8 197 78.7
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 3.0e-84 315.5 197 78.2
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 3.0e-84 315.5 197 77.2
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.0e-84 315.5 197 79.2
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 3.9e-84 315.1 197 77.7
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 5.1e-84 314.7 197 78.2
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.7e-84 314.3 197 77.7
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 6.7e-84 314.3 197 78.2
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 8.7e-84 313.9 197 77.7
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.1e-83 313.5 197 76.6
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.1e-83 313.5 197 76.6
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.1e-83 313.5 234 70.5
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.5e-83 313.2 194 78.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.5e-83 313.2 197 76.1
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 2.5e-83 312.4 197 77.7
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 3.3e-83 312.0 197 76.6
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 5.6e-83 311.2 197 75.6
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 5.6e-83 311.2 196 77.0
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 7.4e-83 310.8 197 75.6
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 9.6e-83 310.5 197 76.6
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.3e-82 310.1 197 76.6
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 1.3e-82 310.1 197 77.7
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.3e-82 310.1 197 77.7
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 1.3e-82 310.1 197 78.2
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 1.3e-82 310.1 194 78.4
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.3e-82 310.1 198 77.8
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.6e-82 309.7 197 77.7
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.6e-82 309.7 197 76.1
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 3.7e-82 308.5 197 76.6
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 4.8e-82 308.1 196 77.0
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 4.8e-82 308.1 197 77.2
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 6.2e-82 307.8 197 77.7
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 6.2e-82 307.8 219 71.7
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 8.1e-82 307.4 197 76.1
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.8e-81 306.2 197 77.7
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.8e-81 306.2 197 77.7
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 2.4e-81 305.8 194 76.3
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 4.0e-81 305.1 197 75.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 1.2e-80 303.5 194 75.8
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.2e-80 303.5 198 75.3
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 4.9e-79 298.1 170 87.1
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 8.4e-79 297.4 198 75.3
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.4e-79 297.4 215 70.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 9.3e-78 293.9 197 73.1
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.5e-75 286.6 194 74.7
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.3e-74 283.5 258 60.5
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 4.8e-74 281.6 198 70.7
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.1e-73 280.4 196 70.9
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 5.3e-73 278.1 195 70.8
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.3e-68 262.7 194 68.0
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 4.3e-67 258.5 198 62.6
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 6.9e-65 251.1 158 78.5
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 2.6e-64 249.2 172 73.3
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 5.9e-64 248.1 200 61.0
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.2e-61 240.4 197 64.0
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 2.0e-59 233.0 197 61.9
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 4.4e-59 231.9 194 64.4
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 7.4e-59 231.1 199 55.8
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.5e-56 223.4 198 54.0
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 5.9e-56 221.5 161 70.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.2e-53 213.8 198 50.5
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 3.0e-52 209.1 173 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 7.7e-48 194.5 169 53.3
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.3e-41 171.8 198 42.4
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 4.7e-37 158.7 224 37.9
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 5.2e-28 128.6 77 81.8
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 9.8e-27 124.4 197 43.1
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.8e-25 120.2 74 79.7
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.0e-23 112.1 192 39.1
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.0e-23 112.1 192 39.1
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.5e-22 109.8 194 32.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 5.6e-22 108.6 74 67.6
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 4.0e-12 75.9 181 29.3
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.6e-11 73.2 48 72.9
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.6e-11 73.2 48 72.9


User provided reference genes

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