Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 1.7e-165 585.9 280 100.0
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 2.0e-118 429.5 277 72.6
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 1.9e-116 422.9 280 71.4
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 5.3e-103 378.3 281 65.1
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 6.9e-103 377.9 281 65.1
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 4.6e-99 365.2 279 64.2
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 8.7e-98 360.9 277 63.2
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 2.8e-96 355.9 277 62.8
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 8.2e-96 354.4 278 62.2
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 1.1e-95 354.0 280 61.1
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 1.1e-95 354.0 282 62.1
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 3.1e-95 352.4 278 62.2
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 6.9e-95 351.3 277 61.7
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 6.9e-95 351.3 278 62.2
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 6.9e-95 351.3 278 62.2
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 1.2e-94 350.5 278 63.3
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.2e-94 350.5 279 61.3
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 2.0e-94 349.7 282 63.1
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 2.9e-93 345.9 281 60.1
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 2.1e-91 339.7 279 59.5
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 6.1e-91 338.2 282 59.6
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 6.1e-91 338.2 284 56.7
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 7.9e-91 337.8 285 58.2
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 7.9e-91 337.8 279 56.6
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.0e-90 337.4 280 59.6
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 3.9e-90 335.5 281 56.9
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 3.9e-90 335.5 279 57.7
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 8.8e-90 334.3 235 66.4
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 2.0e-89 333.2 278 56.5
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 2.5e-89 332.8 282 57.8
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 7.4e-89 331.3 282 59.6
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 2.2e-88 329.7 271 59.4
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 2.2e-88 329.7 279 58.8
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 1.8e-87 326.6 312 55.8
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.4e-87 326.2 278 58.6
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 5.3e-87 325.1 374 47.3
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 9.1e-87 324.3 278 58.3
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 2.0e-86 323.2 284 56.3
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 3.4e-86 322.4 316 54.1
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 5.9e-86 321.6 279 57.7
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 7.7e-86 321.2 280 56.1
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.0e-85 320.9 281 55.5
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 1.3e-85 320.5 280 56.1
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 3.8e-85 318.9 278 56.8
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 5.0e-85 318.5 279 54.5
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 8.5e-85 317.8 278 56.8
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 2.5e-84 316.2 277 57.4
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 3.2e-84 315.8 276 55.8
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 4.2e-84 315.5 274 55.8
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 9.4e-84 314.3 274 54.7
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 9.4e-84 314.3 281 55.5
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.2e-83 313.9 275 54.5
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 1.6e-83 313.5 277 57.0
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 1.6e-83 313.5 279 55.2
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 3.6e-83 312.4 279 57.0
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 3.6e-83 312.4 354 46.0
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 6.1e-83 311.6 277 56.0
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 6.1e-83 311.6 277 56.0
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 6.1e-83 311.6 276 54.7
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 1.4e-82 310.5 283 53.7
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 2.3e-82 309.7 277 56.0
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 6.7e-82 308.1 281 54.8
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 8.8e-82 307.8 277 56.7
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 8.8e-82 307.8 282 55.0
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 2.6e-81 306.2 277 56.0
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 2.6e-81 306.2 274 55.1
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 3.3e-81 305.8 276 54.0
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 1.3e-80 303.9 276 55.8
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 1.7e-80 303.5 278 54.7
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 2.8e-80 302.8 278 53.6
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 8.2e-80 301.2 278 54.7
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 7.0e-79 298.1 251 56.2
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 9.1e-79 297.7 275 53.8
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 4.5e-78 295.4 267 53.6
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 1.0e-77 294.3 272 54.8
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 1.3e-77 293.9 269 54.3
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.7e-77 293.5 205 62.4
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 2.7e-75 286.2 269 55.8
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.0e-74 284.3 277 54.9
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 9.1e-71 271.2 251 53.8
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 5.9e-70 268.5 279 50.2
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 7.7e-70 268.1 260 51.9
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 1.3e-69 267.3 276 48.6
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 8.0e-67 258.1 241 50.6
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 1.8e-66 256.9 210 58.1
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 3.0e-66 256.1 499 33.7
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.3e-64 250.8 281 50.2
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 1.2e-62 244.2 278 44.2
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 1.2e-57 227.6 158 65.2
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 2.3e-53 213.4 189 55.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.3e-52 209.5 217 50.7
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 1.6e-51 207.2 232 42.2
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 3.2e-47 193.0 185 54.1
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 3.5e-46 189.5 186 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 2.5e-44 183.3 168 45.8
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 4.3e-44 182.6 260 37.7
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 6.8e-42 175.3 220 37.7
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 2.0e-41 173.7 108 68.5
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 3.2e-39 166.4 183 47.5
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 1.3e-32 144.4 100 62.0
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 6.8e-26 122.1 142 50.0
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 8.4e-24 115.2 124 45.2
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 4.6e-22 109.4 75 60.0
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 7.8e-22 108.6 71 66.2
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 2.3e-21 107.1 98 53.1
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 2.5e-20 103.6 60 76.7
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 5.8e-17 92.4 68 52.9
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 3.0e-13 80.1 330 22.7
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 3.9e-13 79.7 214 26.2
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 4.2e-07 59.7 281 23.1
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 7.1e-07 58.9 46 52.2


User provided reference genes

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