Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 3.8e-76 288.1 148 100.0
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.3e-63 246.5 141 85.1
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 4.8e-63 244.6 139 87.1
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 5.3e-62 241.1 140 84.3
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.2e-61 240.0 136 86.8
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.6e-61 239.6 146 80.8
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 3.5e-61 238.4 144 79.2
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 7.7e-61 237.3 138 85.5
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 7.7e-61 237.3 138 82.6
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 1.0e-60 236.9 143 81.8
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.3e-60 236.5 146 80.8
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 1.7e-60 236.1 138 81.9
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 2.2e-60 235.7 145 77.2
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 2.2e-60 235.7 138 80.4
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.8e-60 235.0 138 81.9
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 5.0e-60 234.6 150 79.3
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 6.5e-60 234.2 145 77.2
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 6.5e-60 234.2 138 81.2
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.1e-59 233.4 143 78.3
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.9e-59 232.6 136 86.0
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.9e-59 232.6 136 82.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.9e-59 232.6 141 80.1
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 2.5e-59 232.3 136 83.1
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 4.2e-59 231.5 135 84.4
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 4.2e-59 231.5 142 79.6
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 4.2e-59 231.5 145 75.9
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 5.5e-59 231.1 136 82.4
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 7.2e-59 230.7 139 80.6
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 9.4e-59 230.3 135 82.2
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 9.4e-59 230.3 136 83.1
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 9.4e-59 230.3 136 83.1
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.2e-58 229.9 135 82.2
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.1e-58 229.2 145 75.2
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.7e-58 228.8 143 78.3
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.7e-58 228.8 141 78.7
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 3.6e-58 228.4 138 79.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.6e-58 228.4 138 79.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 4.7e-58 228.0 138 80.4
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 6.1e-58 227.6 141 78.0
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.0e-57 226.9 139 82.7
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.0e-57 226.9 145 74.5
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.4e-57 226.5 136 80.9
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.3e-57 225.7 142 78.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 4.0e-57 224.9 138 79.7
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 4.0e-57 224.9 138 79.0
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 4.0e-57 224.9 146 75.3
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 6.7e-57 224.2 154 74.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 8.8e-57 223.8 138 79.0
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 1.5e-56 223.0 143 77.6
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.5e-56 223.0 143 77.6
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.5e-56 223.0 138 79.7
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 2.0e-56 222.6 138 79.0
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.6e-56 222.2 138 77.5
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 4.4e-56 221.5 135 80.0
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.7e-56 221.1 143 76.9
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 5.7e-56 221.1 143 76.9
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 6.3e-55 217.6 125 84.8
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.8e-54 216.1 124 85.5
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.8e-54 216.1 145 69.0
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.4e-54 215.7 137 75.2
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.4e-54 215.7 137 75.2
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 4.1e-54 214.9 140 75.7
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 5.3e-54 214.5 143 73.4
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 5.9e-53 211.1 136 75.7
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 7.7e-53 210.7 135 80.0
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-52 209.5 143 72.7
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 5.0e-52 208.0 150 70.0
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 6.5e-52 207.6 146 75.3
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.1e-51 206.8 145 73.1
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.9e-51 206.1 125 78.4
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.4e-51 203.8 193 61.7
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.2e-50 203.4 137 73.0
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.6e-50 203.0 135 76.3
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 6.1e-50 201.1 138 73.9
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.8e-49 199.5 135 74.8
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 3.7e-47 191.8 140 69.3
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.8e-46 189.5 145 69.7
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 5.9e-45 184.5 140 65.0
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 5.9e-45 184.5 107 82.2
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 7.7e-45 184.1 104 83.7
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.7e-44 183.0 137 67.2
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.7e-44 183.0 135 65.2
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 3.3e-43 178.7 109 76.1
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 2.8e-42 175.6 151 60.3
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.8e-41 172.9 128 69.5
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.3e-41 172.6 138 63.0
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 3.0e-41 172.2 139 61.2
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 7.5e-40 167.5 125 67.2
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 9.8e-40 167.2 136 60.3
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 4.9e-39 164.9 136 59.6
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 8.3e-39 164.1 136 58.8
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 1.1e-38 163.7 133 60.2
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 2.4e-38 162.5 136 58.8
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 3.1e-38 162.2 136 58.1
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 5.4e-38 161.4 136 58.8
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 5.4e-38 161.4 136 58.8
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 7.0e-38 161.0 145 55.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.2e-37 160.2 136 58.1
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.2e-37 160.2 136 58.1
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.6e-37 159.8 136 57.4
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.6e-37 159.8 139 52.5
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 2.7e-37 159.1 136 61.0
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 7.8e-37 157.5 136 56.6
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.3e-36 156.8 136 57.4
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.3e-36 156.8 136 57.4
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 6.6e-36 154.5 113 68.1
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.0e-33 147.1 111 65.8
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 3.0e-33 145.6 107 67.3
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 5.4e-30 134.8 135 52.6
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.7e-29 132.5 137 53.3
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 8.6e-28 127.5 143 54.5
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 2.1e-26 122.9 80 72.5
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 4.4e-24 115.2 66 83.3
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 2.4e-22 109.4 64 76.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.7e-15 86.7 61 67.2
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 4.9e-15 85.1 70 58.6
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.0e-13 78.2 51 78.4
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 1.0e-12 77.4 105 43.8
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 1.3e-07 60.5 41 73.2
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 4.9e-07 58.5 34 79.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 4.9e-07 58.5 34 79.4
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 4.9e-07 58.5 132 31.1


User provided reference genes

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