Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 2.3e-76 290.0 335 100.0
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 3.2e-62 243.0 335 92.2
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 5.4e-62 242.3 335 92.2
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 6.0e-61 238.8 335 91.0
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 1.7e-60 237.3 335 91.3
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 2.2e-55 220.3 326 90.5
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 2.9e-55 219.9 351 86.6
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 6.4e-55 218.8 330 90.3
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 8.4e-55 218.4 326 91.7
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 1.4e-54 217.6 335 87.8
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 2.4e-54 216.9 327 90.8
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 2.4e-54 216.9 327 90.8
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 2.4e-54 216.9 326 90.5
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 2.4e-54 216.9 323 91.0
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 2.4e-54 216.9 326 89.3
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 2.4e-54 216.9 333 88.9
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 3.2e-54 216.5 326 90.5
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 4.2e-54 216.1 330 88.8
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 4.2e-54 216.1 330 90.3
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 4.2e-54 216.1 330 90.3
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 5.4e-54 215.7 351 78.6
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 9.3e-54 214.9 322 87.3
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 1.2e-53 214.5 330 89.4
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 1.2e-53 214.5 327 90.2
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.2e-53 214.5 322 91.3
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.2e-53 214.5 333 89.2
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 1.6e-53 214.2 323 90.7
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.6e-53 214.2 322 91.0
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.6e-53 214.2 333 88.9
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 1.6e-53 214.2 326 90.5
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 3.5e-53 213.0 324 89.2
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 3.5e-53 213.0 333 88.9
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 4.6e-53 212.6 323 90.1
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 4.6e-53 212.6 333 88.9
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 6.0e-53 212.2 323 91.0
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 6.0e-53 212.2 330 89.1
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.0e-52 211.5 309 92.9
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 1.0e-52 211.5 324 90.4
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.3e-52 211.1 309 92.6
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 1.3e-52 211.1 319 89.3
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 1.3e-52 211.1 330 88.8
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 1.3e-52 211.1 324 90.1
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 1.3e-52 211.1 330 90.0
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.7e-52 210.7 326 89.9
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 2.3e-52 210.3 309 92.2
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 3.0e-52 209.9 338 77.8
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 3.9e-52 209.5 321 90.3
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 3.9e-52 209.5 319 91.8
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 3.9e-52 209.5 323 88.9
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 5.1e-52 209.1 325 89.2
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 5.1e-52 209.1 315 87.9
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 6.6e-52 208.8 319 91.8
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 8.7e-52 208.4 316 88.9
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 1.1e-51 208.0 325 90.5
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 1.1e-51 208.0 325 90.5
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 1.1e-51 208.0 319 91.5
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 1.1e-51 208.0 319 91.5
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 1.1e-51 208.0 320 90.6
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 1.1e-51 208.0 320 90.6
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.5e-51 207.6 319 91.2
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 1.5e-51 207.6 326 89.6
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.9e-51 207.2 311 92.6
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.9e-51 207.2 319 90.6
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.9e-51 207.2 324 87.7
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 1.9e-51 207.2 332 88.6
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 1.9e-51 207.2 333 83.5
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 2.5e-51 206.8 331 88.8
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 3.3e-51 206.5 319 91.2
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 4.3e-51 206.1 330 88.8
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 4.3e-51 206.1 324 85.5
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 4.3e-51 206.1 319 90.6
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 5.6e-51 205.7 325 89.2
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 5.6e-51 205.7 322 89.1
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 5.6e-51 205.7 324 89.5
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 5.6e-51 205.7 321 87.5
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 9.6e-51 204.9 319 88.1
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 1.3e-50 204.5 323 88.9
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 1.6e-50 204.1 320 90.3
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 1.6e-50 204.1 319 90.9
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 2.1e-50 203.8 319 90.9
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 2.8e-50 203.4 320 88.1
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 3.6e-50 203.0 326 87.7
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.8e-50 202.6 320 90.3
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 6.2e-50 202.2 319 90.3
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 6.2e-50 202.2 319 90.3
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 6.2e-50 202.2 322 87.9
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 8.1e-50 201.8 324 88.9
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 1.4e-49 201.1 320 86.2
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 2.4e-49 200.3 335 77.9
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 2.4e-49 200.3 319 87.8
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 2.4e-49 200.3 320 89.4
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 3.1e-49 199.9 319 90.0
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 4.0e-49 199.5 324 88.9
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 5.3e-49 199.1 322 87.3
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 6.9e-49 198.7 301 93.4
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 1.2e-48 198.0 323 89.2
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 1.2e-48 198.0 328 77.1
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 1.2e-48 198.0 247 89.1
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 2.0e-48 197.2 319 87.5
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 2.6e-48 196.8 320 89.4
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.8e-48 195.7 320 88.8
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 7.6e-48 195.3 320 89.4
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 7.6e-48 195.3 329 61.4
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 7.6e-48 195.3 352 63.9
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 1.3e-47 194.5 320 89.1
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 1.7e-47 194.1 324 73.5
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 2.2e-47 193.7 315 90.2
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 2.9e-47 193.4 298 92.6
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 6.4e-47 192.2 293 78.2
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 8.4e-47 191.8 335 73.4
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.1e-46 191.4 314 87.6
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 1.1e-46 191.4 307 87.6
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 1.4e-46 191.0 372 65.1
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 1.9e-46 190.7 247 84.6
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 5.4e-46 189.1 241 88.4
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 7.1e-46 188.7 332 85.5
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 4.6e-45 186.0 339 72.0
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 2.3e-44 183.7 320 84.4
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.9e-44 183.0 326 83.4
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 3.9e-44 183.0 326 83.4
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.9e-43 180.6 325 79.7
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.9e-43 180.6 325 79.7
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 7.4e-43 178.7 242 69.4
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 2.8e-42 176.8 320 86.6
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 4.8e-42 176.0 326 85.9
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 6.2e-42 175.6 334 84.7
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 1.1e-41 174.9 333 84.1
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 4.0e-41 172.9 225 92.0
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 6.9e-41 172.2 334 70.1
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.2e-40 171.4 328 68.6
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 1.5e-40 171.0 316 85.4
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.5e-40 171.0 333 79.9
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 1.5e-40 171.0 333 83.5
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 2.6e-40 170.2 338 81.1
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 4.5e-40 169.5 313 84.0
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.8e-39 166.4 256 81.2
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 4.9e-39 166.0 313 82.7
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.1e-38 164.9 313 85.0
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 1.1e-38 164.9 98 79.6
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.4e-38 164.5 109 75.2
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 1.9e-38 164.1 315 86.3
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 3.2e-38 163.3 108 75.9
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 4.2e-38 162.9 97 80.4
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 4.2e-38 162.9 96 80.2
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 4.2e-38 162.9 96 80.2
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 9.3e-38 161.8 315 85.7
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 2.7e-37 160.2 333 51.7
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 1.0e-36 158.3 109 76.1
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 2.3e-36 157.1 313 84.0
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 6.7e-36 155.6 95 78.9
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 6.7e-36 155.6 95 78.9
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.9e-35 154.1 106 72.6
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 9.6e-35 151.8 246 79.3
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 1.6e-34 151.0 108 71.3
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 1.1e-33 148.3 81 85.2
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 1.9e-30 137.5 86 76.7
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 7.1e-30 135.6 306 78.4
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 2.1e-29 134.0 306 78.1
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 3.0e-28 130.2 75 80.0
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 3.3e-27 126.7 88 64.8
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.0e-23 112.8 280 78.9
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.2e-18 97.4 67 68.7
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.2e-18 97.4 64 62.5
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.4e-17 94.0 75 64.0
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.4e-17 94.0 64 60.9
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 2.0e-16 90.9 247 70.9
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 2.6e-16 90.5 52 80.8
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 4.5e-16 89.7 120 86.7
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.8e-15 86.7 256 86.3
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 6.5e-15 85.9 120 52.5
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 2.7e-13 80.5 50 74.0
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 7.9e-13 79.0 80 53.8
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 4.4e-11 73.2 41 80.5
RcHm_v2.0_Chr3g0459551 Rosa chinensis HOM05D003751 ORTHO05D004765 2.8e-10 70.5 50 74.0
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 8.2e-10 68.9 41 78.0
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 1.8e-09 67.8 98 48.0
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 7.0e-09 65.9 41 75.6
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 1.5e-08 64.7 98 45.9
BraA02t09094Z Brassica rapa HOM05D003751 ORTHO05D004765 6.5e-07 59.3 53 64.2
Sopen01g022300 Solanum pennellii HOM05D003751 ORTHO05D004765 1.1e-06 58.5 32 81.2


User provided reference genes

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