Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 7.3e-121 437.6 278 100.0
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 2.3e-29 133.7 328 36.0
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 5.4e-23 112.5 306 42.8
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 4.5e-22 109.4 292 47.6
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 3.9e-21 106.3 312 45.2
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.2e-19 101.3 295 38.3
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.2e-19 101.3 295 38.3
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 1.6e-19 100.9 315 38.1
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 1.6e-19 100.9 294 40.1
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 3.6e-19 99.8 285 42.5
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.0e-18 98.2 304 33.6
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 1.8e-18 97.4 325 41.5
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 2.3e-18 97.1 329 44.4
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 3.1e-18 96.7 310 38.1
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 5.2e-18 95.9 312 44.2
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 6.8e-18 95.5 298 36.6
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 8.9e-18 95.1 309 36.9
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 1.2e-17 94.7 302 40.7
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.5e-17 94.4 297 38.4
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 2.2e-16 90.5 331 43.8
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 2.2e-16 90.5 312 39.4
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 2.9e-16 90.1 319 39.5
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 3.7e-16 89.7 309 39.2
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.7e-16 89.7 306 40.5
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 4.9e-16 89.4 276 37.3
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 6.4e-16 89.0 312 44.6
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 6.4e-16 89.0 337 43.0
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 6.4e-16 89.0 309 38.5
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 6.4e-16 89.0 310 42.9
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 6.4e-16 89.0 281 31.3
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 6.4e-16 89.0 313 37.1
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 6.4e-16 89.0 314 37.6
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 8.3e-16 88.6 307 45.9
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 8.3e-16 88.6 314 38.2
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 8.3e-16 88.6 307 41.7
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 8.3e-16 88.6 314 38.2
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 8.3e-16 88.6 336 39.0
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-15 88.2 267 38.2
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.4e-15 87.8 285 40.0
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 1.4e-15 87.8 286 39.5
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.9e-15 87.4 280 42.9
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.9e-15 87.4 280 42.9
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.9e-15 87.4 318 45.0
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 1.9e-15 87.4 324 44.4
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.9e-15 87.4 312 44.2
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 4.1e-15 86.3 332 43.7
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 4.1e-15 86.3 351 38.5
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 4.1e-15 86.3 285 44.6
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 7.0e-15 85.5 315 37.8
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 9.2e-15 85.1 308 29.9
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 9.2e-15 85.1 276 39.1
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 9.2e-15 85.1 301 42.9
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 1.2e-14 84.7 288 37.5
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.5e-14 83.2 271 40.6
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 4.6e-14 82.8 325 42.2
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 4.6e-14 82.8 291 35.7
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.3e-13 81.3 291 34.0
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 6.6e-13 79.0 340 35.6
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 8.6e-13 78.6 307 38.1
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.5e-12 77.8 276 42.0
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.5e-12 77.0 325 40.3
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 2.5e-12 77.0 312 37.5
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 2.5e-12 77.0 323 32.2
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 2.5e-12 77.0 311 33.8
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.5e-12 77.0 288 41.0
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 4.3e-12 76.3 328 27.4
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 5.6e-12 75.9 304 39.1
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 5.6e-12 75.9 324 41.7
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 7.3e-12 75.5 319 37.3
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.5e-12 75.1 324 41.7
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 9.5e-12 75.1 295 36.6
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.2e-11 74.7 289 32.9
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.8e-11 73.6 315 30.2
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 2.8e-11 73.6 323 27.2
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 3.6e-11 73.2 326 32.5
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.6e-11 73.2 326 32.5
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 4.7e-11 72.8 329 33.1
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 6.2e-11 72.4 312 34.9
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 6.2e-11 72.4 312 31.4
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.8e-10 70.9 281 28.1
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 3.1e-10 70.1 301 45.2
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 3.1e-10 70.1 301 45.2
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 3.1e-10 70.1 301 45.2
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 5.2e-10 69.3 121 43.0
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 6.8e-10 68.9 324 44.4
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 6.8e-10 68.9 281 28.1
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 6.8e-10 68.9 331 36.0
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 8.9e-10 68.6 306 32.0
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 8.9e-10 68.6 300 38.7
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 8.9e-10 68.6 111 47.7
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.2e-09 68.2 277 30.3
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 1.5e-09 67.8 111 44.1
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 1.5e-09 67.8 118 44.9
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 2.0e-09 67.4 329 40.4
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.6e-09 67.0 311 39.5
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 3.4e-09 66.6 225 48.0
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 4.4e-09 66.2 325 26.5
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 7.5e-09 65.5 108 38.9
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 2.2e-08 63.9 269 41.3
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.9e-08 63.5 286 36.4
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 6.4e-08 62.4 115 39.1
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 6.4e-08 62.4 258 27.1
Migut.L01171 Erythranthe guttata HOM05D004533 ORTHO05D005347 1.1e-07 61.6 132 39.4
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 1.1e-07 61.6 123 39.8
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.1e-07 61.6 286 42.3
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 1.4e-07 61.2 290 37.6
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.9e-07 60.8 324 25.9
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 1.9e-07 60.8 306 31.0
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 2.4e-07 60.5 282 34.0
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.4e-07 60.5 115 40.0
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 3.2e-07 60.1 291 37.8
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 3.2e-07 60.1 293 37.9
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 3.2e-07 60.1 291 37.8
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.2e-07 60.1 292 27.4
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.4e-07 59.3 120 36.7
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 7.1e-07 58.9 298 38.9
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 7.1e-07 58.9 291 37.8
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 7.1e-07 58.9 274 29.2
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 9.2e-07 58.5 333 25.5
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 9.2e-07 58.5 239 30.1
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 1.2e-06 58.2 300 26.0
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.6e-06 57.8 353 38.2
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.6e-06 57.8 353 38.0
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 2.7e-06 57.0 300 38.0
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 2.7e-06 57.0 294 37.4
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 2.7e-06 57.0 333 25.5
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 2.7e-06 57.0 288 39.9
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 4.6e-06 56.2 254 44.1
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 7.8e-06 55.5 309 27.2
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 7.8e-06 55.5 310 39.4
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 7.8e-06 55.5 97 37.1


User provided reference genes

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