Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.9e-45 184.5 98 100.0
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 2.0e-28 129.0 104 63.5
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 9.7e-28 126.7 100 64.0
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 1.3e-27 126.3 95 62.1
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 1.3e-27 126.3 95 62.1
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 1.3e-27 126.3 95 62.1
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 1.3e-27 126.3 95 62.1
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.7e-27 125.9 94 62.8
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.2e-27 125.6 96 72.9
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 3.7e-27 124.8 95 61.1
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 4.8e-27 124.4 96 64.6
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 6.3e-27 124.0 92 60.9
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 6.3e-27 124.0 100 62.0
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.1e-26 123.2 94 61.7
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 1.8e-26 122.5 95 60.0
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 1.8e-26 122.5 93 62.4
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 2.4e-26 122.1 101 60.4
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.4e-26 122.1 100 62.0
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 2.4e-26 122.1 100 65.0
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 2.4e-26 122.1 100 64.0
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 4.1e-26 121.3 100 63.0
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 7.0e-26 120.6 95 60.0
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 7.0e-26 120.6 95 60.0
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 7.0e-26 120.6 95 60.0
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 7.0e-26 120.6 98 64.3
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 7.0e-26 120.6 99 66.7
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 9.1e-26 120.2 94 61.7
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 9.1e-26 120.2 99 61.6
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.2e-25 119.8 96 61.5
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.2e-25 119.8 94 57.4
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 1.2e-25 119.8 96 59.4
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 1.2e-25 119.8 98 62.2
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.2e-25 119.8 102 66.7
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.2e-25 119.8 93 61.3
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 1.5e-25 119.4 95 58.9
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.5e-25 119.4 92 70.7
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 1.5e-25 119.4 96 63.5
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 2.0e-25 119.0 94 60.6
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 2.0e-25 119.0 100 58.0
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 2.6e-25 118.6 100 64.0
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 2.6e-25 118.6 97 58.8
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 4.5e-25 117.9 94 69.1
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 5.9e-25 117.5 95 57.9
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 5.9e-25 117.5 96 62.5
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 5.9e-25 117.5 96 62.5
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 5.9e-25 117.5 100 59.0
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 7.7e-25 117.1 94 57.4
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 1.0e-24 116.7 93 61.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.0e-24 116.7 95 56.8
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.0e-24 116.7 97 67.0
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 1.0e-24 116.7 98 59.2
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.0e-24 116.7 93 60.2
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.0e-24 116.7 93 60.2
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.0e-24 116.7 98 60.2
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.0e-24 116.7 99 59.6
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.3e-24 116.3 95 63.2
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.3e-24 116.3 95 58.9
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.7e-24 115.9 100 59.0
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 1.7e-24 115.9 97 66.0
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 2.9e-24 115.2 94 60.6
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.9e-24 115.2 94 67.0
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 5.0e-24 114.4 93 60.2
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 6.5e-24 114.0 95 58.9
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 6.5e-24 114.0 100 64.0
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 6.5e-24 114.0 100 64.0
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.5e-24 113.6 100 65.0
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.5e-24 113.6 93 62.4
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 8.5e-24 113.6 96 61.5
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 1.1e-23 113.2 95 58.9
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.9e-23 112.5 97 63.9
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.9e-23 112.5 96 61.5
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 2.5e-23 112.1 96 66.7
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 2.5e-23 112.1 96 59.4
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 2.5e-23 112.1 96 62.5
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 3.2e-23 111.7 96 56.2
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 5.5e-23 110.9 94 57.4
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.4e-23 110.2 85 70.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.4e-23 110.2 85 70.6
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 9.4e-23 110.2 100 57.0
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 1.2e-22 109.8 97 54.6
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 1.2e-22 109.8 97 54.6
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.6e-22 109.4 94 56.4
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.1e-22 109.0 92 57.6
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.1e-22 109.0 92 57.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 3.6e-22 108.2 100 66.0
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 6.1e-22 107.5 93 61.3
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 6.1e-22 107.5 87 57.5
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 8.0e-22 107.1 98 53.1
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 8.0e-22 107.1 92 56.5
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 8.0e-22 107.1 92 56.5
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 1.0e-21 106.7 98 59.2
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.0e-21 106.7 92 56.5
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.8e-21 105.9 94 66.0
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 2.3e-21 105.5 100 56.0
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 2.3e-21 105.5 100 56.0
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 4.0e-21 104.8 95 57.9
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 4.0e-21 104.8 98 63.3
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 8.8e-21 103.6 92 55.4
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 2.6e-20 102.1 100 54.0
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 4.4e-20 101.3 101 54.5
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 9.7e-20 100.1 100 55.0
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.3e-19 99.8 104 59.6
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.3e-19 99.8 90 55.6
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 2.2e-19 99.0 81 58.0
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 3.7e-19 98.2 111 50.5
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.7e-19 98.2 100 52.0
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 2.4e-18 95.5 90 62.2
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.2e-17 93.2 95 54.7
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 2.0e-17 92.4 88 52.3
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.6e-17 92.0 99 51.5
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.0e-16 90.1 99 50.5
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 6.5e-16 87.4 79 55.7
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.5e-16 87.4 101 45.5
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.5e-15 84.3 91 44.0
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.5e-15 84.3 99 43.4
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.6e-14 82.8 78 56.4
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.6e-14 82.8 98 53.1
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.3e-13 79.0 98 48.0
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 3.0e-13 78.6 78 51.3
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 6.8e-13 77.4 96 49.0
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.2e-12 76.6 97 49.5
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 1.5e-12 76.3 94 47.9
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 4.4e-12 74.7 106 45.3
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 7.5e-12 73.9 103 47.6
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.7e-11 71.6 98 40.8
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 1.9e-07 59.3 88 36.4


User provided reference genes

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