Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 5.0e-95 351.3 202 100.0
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 2.3e-31 139.8 211 48.8
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 3.4e-19 99.4 209 35.4
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 4.5e-19 99.0 195 34.9
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 4.5e-19 99.0 193 35.2
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 4.5e-19 99.0 210 38.1
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 1.0e-18 97.8 202 34.7
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.7e-18 97.1 207 35.7
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 6.5e-18 95.1 219 31.1
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 8.4e-18 94.7 220 32.7
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.1e-17 94.4 159 39.0
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.1e-17 94.4 197 36.5
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.5e-17 93.2 200 33.5
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 2.5e-17 93.2 207 35.3
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 3.2e-17 92.8 163 37.4
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 3.2e-17 92.8 198 33.3
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 4.2e-17 92.4 196 34.2
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 7.1e-17 91.7 202 38.6
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 7.1e-17 91.7 215 32.1
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 9.3e-17 91.3 165 41.2
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.6e-16 90.5 159 39.0
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 1.6e-16 90.5 170 39.4
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 2.1e-16 90.1 198 33.8
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 2.1e-16 90.1 218 37.2
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 4.6e-16 89.0 170 35.9
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 4.6e-16 89.0 210 31.0
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 7.9e-16 88.2 215 31.6
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 7.9e-16 88.2 202 33.7
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.0e-15 87.8 194 33.5
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.0e-15 87.8 163 38.0
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.3e-15 87.4 163 37.4
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.8e-15 87.0 164 35.4
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 1.8e-15 87.0 193 35.2
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 2.3e-15 86.7 217 32.7
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 2.3e-15 86.7 196 32.1
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 2.3e-15 86.7 202 34.2
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 2.3e-15 86.7 206 34.0
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 3.0e-15 86.3 203 33.5
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 5.1e-15 85.5 211 32.2
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 5.1e-15 85.5 161 34.8
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 5.1e-15 85.5 195 31.8
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 6.7e-15 85.1 167 34.1
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 8.7e-15 84.7 205 33.7
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 8.7e-15 84.7 163 37.4
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 8.7e-15 84.7 213 32.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 1.1e-14 84.3 193 35.2
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 1.9e-14 83.6 155 34.2
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 2.5e-14 83.2 104 42.3
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 4.3e-14 82.4 205 30.2
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 4.3e-14 82.4 166 37.3
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 7.4e-14 81.6 95 45.3
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 7.4e-14 81.6 116 42.2
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 9.6e-14 81.3 186 34.4
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.6e-13 80.5 195 33.8
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 1.6e-13 80.5 196 33.7
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.1e-13 80.1 194 34.0
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.8e-13 79.7 195 33.3
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 3.7e-13 79.3 141 35.5
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 3.7e-13 79.3 208 30.3
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 3.7e-13 79.3 201 31.8
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 4.8e-13 79.0 187 34.8
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 4.8e-13 79.0 211 29.9
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 6.2e-13 78.6 171 35.7
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 6.2e-13 78.6 196 32.7
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 6.2e-13 78.6 116 41.4
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 8.2e-13 78.2 196 35.7
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.1e-12 77.8 196 32.1
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 1.1e-12 77.8 137 35.0
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.8e-12 77.0 172 34.3
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 1.8e-12 77.0 151 32.5
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 2.4e-12 76.6 192 32.3
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 3.1e-12 76.3 164 31.7
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 5.3e-12 75.5 173 32.4
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 6.9e-12 75.1 166 31.9
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 9.0e-12 74.7 175 32.0
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.0e-11 73.6 99 42.4
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.0e-11 73.6 99 42.4
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 2.6e-11 73.2 209 32.5
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 3.4e-11 72.8 164 32.9
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 3.4e-11 72.8 164 32.9
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 4.5e-11 72.4 50 66.0
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.8e-11 72.0 203 30.0
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 7.6e-11 71.6 168 33.3
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 7.6e-11 71.6 52 61.5
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 7.6e-11 71.6 202 31.2
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 1.0e-10 71.2 199 28.1
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.3e-10 70.9 167 32.9
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 1.3e-10 70.9 167 32.9
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 1.3e-10 70.9 171 30.4
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.7e-10 70.5 146 33.6
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 1.7e-10 70.5 175 31.4
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.7e-10 70.5 165 30.9
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.7e-10 70.5 162 33.3
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 2.9e-10 69.7 165 30.3
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.9e-10 69.7 214 28.0
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 5.0e-10 68.9 111 38.7
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.4e-09 67.4 162 29.6
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.5e-09 66.6 52 61.5
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 2.5e-09 66.6 193 26.9
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 3.2e-09 66.2 165 29.7
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 4.2e-09 65.9 152 32.9
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 5.5e-09 65.5 160 36.9
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 9.3e-09 64.7 198 28.3
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.2e-08 64.3 163 36.2
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.2e-08 64.3 60 53.3
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 1.6e-08 63.9 162 36.4
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 3.5e-08 62.8 157 32.5
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 1.0e-07 61.2 110 38.2
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 1.8e-07 60.5 164 28.7
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 8.7e-07 58.2 163 35.0
Sed0003747 Sechium edule HOM05D006962 ORTHO05D008696 9.7e-06 54.7 197 29.9


User provided reference genes

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