Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.2e-228 796.2 405 100.0
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.2e-137 491.5 414 61.8
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.8e-115 420.2 397 58.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 3.8e-110 402.5 414 52.7
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.6e-108 395.6 416 53.4
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 7.9e-108 394.8 409 54.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.3e-107 394.0 401 56.1
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.5e-106 389.8 415 51.6
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 4.1e-104 382.5 367 57.2
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 6.7e-99 365.2 413 49.6
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.7e-97 360.5 417 48.7
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.4e-96 357.5 364 53.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.4e-96 357.5 417 50.6
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 6.9e-96 355.1 412 51.0
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.2e-95 354.4 423 49.2
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 7.7e-95 351.7 422 49.5
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 7.7e-95 351.7 367 53.7
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 2.5e-93 346.7 375 52.0
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 5.5e-93 345.5 370 50.5
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.2e-92 344.4 413 48.2
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.2e-92 344.4 409 46.5
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 4.7e-92 342.4 403 50.1
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 6.1e-92 342.0 372 50.5
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 7.9e-92 341.7 372 50.3
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.0e-91 341.3 405 48.1
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 5.1e-91 339.0 362 51.4
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 8.8e-91 338.2 409 46.0
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.1e-90 337.8 416 48.1
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.1e-90 337.8 422 49.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.5e-90 337.4 409 46.0
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 1.5e-90 337.4 425 48.7
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.0e-90 337.0 412 48.1
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 3.3e-90 336.3 360 51.4
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 7.4e-90 335.1 381 47.8
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 9.7e-90 334.7 403 47.1
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 3.7e-89 332.8 364 50.8
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 4.8e-89 332.4 406 47.0
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 6.3e-89 332.0 368 51.1
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 8.2e-89 331.6 330 54.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 1.1e-88 331.3 361 51.0
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.8e-88 330.5 371 49.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 4.1e-88 329.3 408 46.3
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 9.1e-88 328.2 363 50.4
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 2.6e-87 326.6 361 51.0
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 2.6e-87 326.6 361 49.3
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 2.6e-87 326.6 354 51.4
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 3.4e-87 326.2 356 52.2
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 4.5e-87 325.9 404 47.3
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 5.9e-87 325.5 367 49.3
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 7.7e-87 325.1 372 48.9
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.0e-86 324.7 402 46.8
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.3e-86 324.3 403 47.6
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 2.9e-86 323.2 357 50.4
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 5.0e-86 322.4 357 50.4
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 5.0e-86 322.4 355 50.7
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 6.5e-86 322.0 359 50.4
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 8.5e-86 321.6 414 45.2
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.1e-85 321.2 398 45.0
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.1e-85 321.2 398 45.0
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 4.2e-85 319.3 351 52.1
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-84 317.8 352 51.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-84 317.8 351 51.9
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.1e-84 315.5 351 51.3
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 8.0e-84 315.1 371 47.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.4e-83 314.3 365 49.9
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.9e-83 312.8 351 51.6
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 6.7e-83 312.0 378 48.4
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.1e-82 311.2 369 47.4
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.7e-81 307.4 365 46.0
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 7.0e-80 302.0 402 44.8
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.6e-79 300.8 364 46.7
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.6e-79 300.8 326 50.0
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.0e-79 300.4 413 45.5
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.6e-79 300.1 401 44.9
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 1.3e-78 297.7 404 45.3
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 5.0e-78 295.8 402 45.5
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 3.2e-77 293.1 359 46.8
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 7.2e-77 292.0 370 44.9
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 6.1e-76 288.9 398 43.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 6.1e-76 288.9 398 43.7
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.4e-75 287.7 328 49.7
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 2.3e-75 287.0 356 45.5
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 5.2e-75 285.8 323 49.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 4.4e-74 282.7 403 43.4
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.0e-70 271.6 356 45.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 2.2e-70 270.4 366 43.7
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.5e-69 267.7 373 45.0
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.6e-68 264.2 361 42.9
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 5.7e-66 255.8 317 50.2
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 5.0e-62 242.7 428 39.7
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.5e-61 241.1 293 47.4
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 4.2e-61 239.6 291 47.8
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 1.0e-59 235.0 372 39.2
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 2.0e-55 220.7 280 44.6
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 3.5e-55 219.9 238 54.2
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.5e-53 214.5 398 38.7
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 5.6e-53 212.6 370 36.5
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.1e-51 206.8 241 49.4
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.1e-51 206.8 241 49.4
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 5.2e-51 206.1 367 38.4
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.1e-43 181.8 258 41.9
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.9e-37 161.0 125 62.4
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.9e-37 161.0 125 62.4
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 4.7e-36 156.4 225 41.3
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 8.1e-36 155.6 175 50.9
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.4e-32 144.8 189 45.0
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 9.2e-32 142.1 324 30.9
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.5e-31 140.2 115 60.0
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.6e-28 131.3 130 50.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 1.2e-26 125.2 362 29.8
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.1e-24 118.6 147 49.0
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.4e-24 117.5 240 34.6
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.0e-22 112.1 339 30.1
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 1.7e-22 111.3 305 30.2
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.9e-21 107.8 133 48.1
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 2.5e-21 107.5 201 39.3
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 3.8e-09 67.0 223 25.6
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 6.7e-06 56.2 170 27.6


User provided reference genes

Program Settings